Empedobacter falsenii strain WF_348

aerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Empedobacter

Description

Empedobacter falsenii strain WF_348 is an aerobic bacterium characterized by its ability to thrive in environments with oxygen. This strain is distinguished by having a single replicon, which indicates it possesses a single circular chromosome. The genomic information for this strain is cataloged under the accession number RHPO00000000.1, providing a reference for further genetic studies and comparisons within the genus Empedobacter. The aerobic nature of Empedobacter falsenii strain WF_348 suggests it plays a role in environments where oxygen is present, potentially participating in processes such as organic matter decomposition or nutrient cycling. Its single replicon may also imply a streamlined genomic organization, which can be advantageous for its adaptability and efficiency in utilizing available resources in its ecological niche. Understanding the traits of Empedobacter falsenii strain WF_348 contributes to the broader knowledge of microbial diversity and functional roles within ecosystems. Its aerobic metabolism may help in biogeochemical cycles, particularly in environments where aerobic conditions prevail. Further studies on this strain could uncover its specific contributions to ecological processes and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusEmpedobacter
SpeciesEmpedobacter falsenii
Strainstrain WF_348

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Empedobacter falsenii strain WF_348

Gene Summary

Adenine Count

1088596 bp

Thymine Count

1104292 bp

Guanine Count

507432 bp

Cytosine Count

501722 bp

Genome Length

3202065 bp

Protein-coding Genes

2973 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
deaminaseEGI89_07910Not AvailablePositive1603256 - 160450045869.1
hypothetical proteinEGI89_07915Not AvailablePositive1604567 - 160503117954.8
dna translocase ftskEGI89_07920Not AvailablePositive1605248 - 160782196732.9
outer membrane lipoprotein carrier protein lolaEGI89_07925Not AvailablePositive1607855 - 160848423716.2
yjgp/yjgq family permeaseEGI89_07930Not AvailablePositive1608488 - 160994856465.7
3,4-dihydroxy-2-butanone-4-phosphate synthaseEGI89_07935Not AvailablePositive1609958 - 161108241767.1
hypothetical proteinEGI89_07940Not AvailablePositive1611192 - 161250250930.6
eama family transporterEGI89_07945Not AvailableNegative1612562 - 161356938172.3
lrp/asnc family transcriptional regulatorEGI89_07950Not AvailableNegative1613585 - 161406117693.8
30s ribosomal protein s1EGI89_07955Not AvailableNegative1614255 - 161608468245.4

Displaying genes 1571 – 1580 of 3070 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.