Marinobacter sp. R17

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Marinobacteraceae

Genus

Marinobacter

Description

Marinobacter sp. R17 is a marine bacterium characterized by the presence of flagella, which suggests a potential for motility in its natural aquatic environment. This motility may play a crucial role in its ability to navigate through marine ecosystems, facilitating access to nutrients and interactions with other microorganisms. The genome of Marinobacter sp. R17 is represented by a single replicon, indicating a streamlined genetic organization that could be advantageous for efficient replication and adaptation to its surroundings. The genomic data is available under the accession number RHGZ00000000.1, providing a resource for further study into its genetic and functional characteristics. The ecological role of Marinobacter sp. R17 may be significant in marine environments, as members of the Marinobacter genus are often associated with the degradation of organic matter and can contribute to biogeochemical cycles. Their motility, combined with their genomic organization, may enhance their capacity to colonize diverse niches within marine habitats, ultimately influencing microbial community dynamics and nutrient cycling. In summary, the flagellated Marinobacter sp. R17, with a single replicon genome, is well-equipped for life in marine ecosystems, potentially playing a vital role in the degradation of organic materials and the overall health of marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyMarinobacteraceae
GenusMarinobacter
SpeciesMarinobacter sp. R17
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinobacter sp. R17 Scaffold64, whole genome shotgun sequence.

Gene Summary

Adenine Count

898921 bp

Thymine Count

887862 bp

Guanine Count

1383693 bp

Cytosine Count

1396662 bp

Genome Length

4567138 bp

Protein-coding Genes

4085 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sarcosine oxidase subunit beta family proteinEB809_19675Not AvailableNegative4308927 - 431018045421.2
l-serine ammonia-lyaseEB809_19680Not AvailableNegative4310400 - 431178249302.2
serine hydroxymethyltransferaseEB809_19685Not AvailableNegative4311867 - 431312945274.5
glxa family transcriptional regulatorEB809_19690Not AvailableNegative4313326 - 431435737317.8
formaldehyde dehydrogenase, glutathione-independentEB809_19695Not AvailablePositive4314502 - 431570142279.6
type vi secretion system paar proteinEB809_19700Not AvailableNegative4316096 - 43163839250.13
type vi secretion system membrane subunit tssmEB809_19705Not AvailableNegative4316491 - 4320087136138.0
type vi secretion system protein tssaEB809_19710Not AvailableNegative4320169 - 432159952303.1
type vi secretion system-associated protein tagoEB809_19715Not AvailableNegative4321632 - 432227623079.4
sigma-54-dependent fis family transcriptional regulatorEB809_19720Not AvailableNegative4322279 - 432385057866.8

Displaying genes 3911 – 3920 of 4141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.