Marinobacter sp. R17

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Marinobacteraceae

Genus

Marinobacter

Description

Marinobacter sp. R17 is a marine bacterium characterized by the presence of flagella, which suggests a potential for motility in its natural aquatic environment. This motility may play a crucial role in its ability to navigate through marine ecosystems, facilitating access to nutrients and interactions with other microorganisms. The genome of Marinobacter sp. R17 is represented by a single replicon, indicating a streamlined genetic organization that could be advantageous for efficient replication and adaptation to its surroundings. The genomic data is available under the accession number RHGZ00000000.1, providing a resource for further study into its genetic and functional characteristics. The ecological role of Marinobacter sp. R17 may be significant in marine environments, as members of the Marinobacter genus are often associated with the degradation of organic matter and can contribute to biogeochemical cycles. Their motility, combined with their genomic organization, may enhance their capacity to colonize diverse niches within marine habitats, ultimately influencing microbial community dynamics and nutrient cycling. In summary, the flagellated Marinobacter sp. R17, with a single replicon genome, is well-equipped for life in marine ecosystems, potentially playing a vital role in the degradation of organic materials and the overall health of marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyMarinobacteraceae
GenusMarinobacter
SpeciesMarinobacter sp. R17
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinobacter sp. R17 Scaffold64, whole genome shotgun sequence.

Gene Summary

Adenine Count

898921 bp

Thymine Count

887862 bp

Guanine Count

1383693 bp

Cytosine Count

1396662 bp

Genome Length

4567138 bp

Protein-coding Genes

4085 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
doxx family proteinEB809_17400Not AvailablePositive3801769 - 380221215363.0
dioxygenaseEB809_17405Not AvailablePositive3802300 - 380313630755.7
polyribonucleotide nucleotidyltransferaseEB809_17410Not AvailableNegative3804123 - 380623776022.8
30s ribosomal protein s15EB809_17415Not AvailableNegative3806738 - 380700710300.4
trna pseudouridine(55) synthase trubEB809_17420Not AvailableNegative3807092 - 380800032777.4
30s ribosome-binding factor rbfaEB809_17425Not AvailableNegative3807997 - 380841015240.3
translation initiation factor if-2EB809_17430Not AvailableNegative3808541 - 381110292374.0
transcription termination/antitermination protein nusaEB809_17435Not AvailableNegative3811122 - 381261555662.0
ribosome maturation factor rimpEB809_17440Not AvailableNegative3812659 - 381312017294.8
Trna-leuNot AvailableNot AvailablePositive3813478 - 3813562Not Available

Displaying genes 3461 – 3470 of 4141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.