Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Erythrobacteraceae
Genus
Porphyrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Erythrobacteraceae |
| Genus | Porphyrobacter |
| Species | Porphyrobacter sp. IPPAS B-1204 |
| Strain | Mongol_c3139 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
637374 bp
Thymine Count
629951 bp
Guanine Count
1131862 bp
Cytosine Count
1150325 bp
Genome Length
3549519 bp
Protein-coding Genes
3188 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | EDM03_04675 | Not Available | Positive | 956755 - 957867 | 39445.7 |
| s-formylglutathione hydrolase | EDM03_04680 | Not Available | Positive | 957867 - 958697 | 29986.3 |
| hypothetical protein | EDM03_04685 | Not Available | Positive | 958915 - 959160 | 7356.74 |
| hypothetical protein | EDM03_04690 | Not Available | Positive | 959227 - 959874 | 23827.9 |
| duf1109 domain-containing protein | EDM03_04695 | Not Available | Negative | 959879 - 960523 | 22116.4 |
| sigma-70 family rna polymerase sigma factor | EDM03_04700 | Not Available | Negative | 960526 - 961017 | 18348.1 |
| prepilin peptidase | EDM03_04705 | Not Available | Positive | 961226 - 961999 | 26065.0 |
| cell wall hydrolase | EDM03_04710 | Not Available | Positive | 962001 - 962735 | 25802.9 |
| hypothetical protein | EDM03_04715 | Not Available | Negative | 962742 - 963545 | 28639.8 |
| type ii secretion system protein gspd | EDM03_04720 | Not Available | Negative | 963605 - 965563 | 69056.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
