Porphyrobacter sp. IPPAS B-1204 Mongol_c3139

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Porphyrobacter

Description

Porphyrobacter sp. IPPAS B-1204, designated as Mongol_c3139, is characterized by having a single replicon, indicating a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number RHGM00000000.1, which serves as a reference for researchers seeking genetic information about this specific microorganism. Porphyrobacter species are known for their ecological roles, often found in phototrophic environments. They possess the ability to perform photosynthesis, which is crucial for energy production in light-available conditions. This metabolic capability suggests that Porphyrobacter sp. IPPAS B-1204 may occupy niches where light is a significant factor, potentially impacting the dynamics of microbial communities in its habitat. The presence of only one replicon in its genome may also imply a reduced complexity in regulatory mechanisms, allowing for rapid response to environmental changes. This characteristic could be advantageous for survival in fluctuating conditions, enhancing the strain's ecological resilience. In summary, Porphyrobacter sp. IPPAS B-1204 represents a unique microbial entity with a simplified genomic architecture that supports its role in phototrophic ecosystems. Its single replicon structure may provide insights into its adaptability and ecological function, making it a candidate for further studies in microbial ecology and physiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusPorphyrobacter
SpeciesPorphyrobacter sp. IPPAS B-1204
StrainMongol_c3139

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Porphyrobacter sp. IPPAS B-1204 Mongol_c3139, whole genome

Gene Summary

Adenine Count

637374 bp

Thymine Count

629951 bp

Guanine Count

1131862 bp

Cytosine Count

1150325 bp

Genome Length

3549519 bp

Protein-coding Genes

3188 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gatb/yqey domain-containing proteinEDM03_00270Not AvailableNegative50990 - 5144216104.5
carbamoyl-phosphate synthase small subunitEDM03_00275Not AvailablePositive51584 - 5276841699.5
carbamoyl-phosphate synthase large subunitEDM03_00280Not AvailablePositive52996 - 56322119052.0
transcription elongation factor greaEDM03_00285Not AvailablePositive56437 - 5691317495.9
hypothetical proteinEDM03_00290Not AvailablePositive56943 - 572069597.52
duf4170 domain-containing proteinEDM03_00295Not AvailableNegative57296 - 575268561.17
hypothetical proteinEDM03_00300Not AvailableNegative57610 - 5818819781.4
hypothetical proteinEDM03_00305Not AvailableNegative58185 - 5855913361.7
phage holin family proteinEDM03_00310Not AvailableNegative58556 - 5900514880.0
hypothetical proteinEDM03_00315Not AvailableNegative59027 - 5964720872.8

Displaying genes 71 – 80 of 3250 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.