Porphyrobacter sp. IPPAS B-1204 Mongol_c3139

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Porphyrobacter

Description

Porphyrobacter sp. IPPAS B-1204, designated as Mongol_c3139, is characterized by having a single replicon, indicating a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number RHGM00000000.1, which serves as a reference for researchers seeking genetic information about this specific microorganism. Porphyrobacter species are known for their ecological roles, often found in phototrophic environments. They possess the ability to perform photosynthesis, which is crucial for energy production in light-available conditions. This metabolic capability suggests that Porphyrobacter sp. IPPAS B-1204 may occupy niches where light is a significant factor, potentially impacting the dynamics of microbial communities in its habitat. The presence of only one replicon in its genome may also imply a reduced complexity in regulatory mechanisms, allowing for rapid response to environmental changes. This characteristic could be advantageous for survival in fluctuating conditions, enhancing the strain's ecological resilience. In summary, Porphyrobacter sp. IPPAS B-1204 represents a unique microbial entity with a simplified genomic architecture that supports its role in phototrophic ecosystems. Its single replicon structure may provide insights into its adaptability and ecological function, making it a candidate for further studies in microbial ecology and physiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusPorphyrobacter
SpeciesPorphyrobacter sp. IPPAS B-1204
StrainMongol_c3139

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Porphyrobacter sp. IPPAS B-1204 Mongol_c3139, whole genome

Gene Summary

Adenine Count

637374 bp

Thymine Count

629951 bp

Guanine Count

1131862 bp

Cytosine Count

1150325 bp

Genome Length

3549519 bp

Protein-coding Genes

3188 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulatorEDM03_02230Not AvailableNegative448801 - 45126086249.2
duf2062 domain-containing proteinEDM03_02235Not AvailableNegative451384 - 45193820390.2
ssra-binding protein smpbEDM03_02240Not AvailableNegative452123 - 45260518549.4
succinylglutamate desuccinylase/aspartoacylase family proteinEDM03_02245Not AvailablePositive452711 - 45377537302.1
4-hydroxy-tetrahydrodipicolinate synthaseEDM03_02250Not AvailableNegative453772 - 45465931731.8
lytic transglycosylase domain-containing proteinEDM03_02255Not AvailablePositive454766 - 45671870808.6
transcription elongation factor grebEDM03_02260Not AvailablePositive456740 - 45721917528.9
hypothetical proteinEDM03_02265Not AvailablePositive457212 - 45768816749.4
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnEDM03_02270Not AvailablePositive457728 - 45898146209.6
hypothetical proteinEDM03_02275Not AvailableNegative458985 - 45931712486.8

Displaying genes 441 – 450 of 3250 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.