Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Erythrobacteraceae
Genus
Porphyrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Erythrobacteraceae |
| Genus | Porphyrobacter |
| Species | Porphyrobacter sp. IPPAS B-1204 |
| Strain | Mongol_c3139 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
637374 bp
Thymine Count
629951 bp
Guanine Count
1131862 bp
Cytosine Count
1150325 bp
Genome Length
3549519 bp
Protein-coding Genes
3188 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | EDM03_02230 | Not Available | Negative | 448801 - 451260 | 86249.2 |
| duf2062 domain-containing protein | EDM03_02235 | Not Available | Negative | 451384 - 451938 | 20390.2 |
| ssra-binding protein smpb | EDM03_02240 | Not Available | Negative | 452123 - 452605 | 18549.4 |
| succinylglutamate desuccinylase/aspartoacylase family protein | EDM03_02245 | Not Available | Positive | 452711 - 453775 | 37302.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EDM03_02250 | Not Available | Negative | 453772 - 454659 | 31731.8 |
| lytic transglycosylase domain-containing protein | EDM03_02255 | Not Available | Positive | 454766 - 456718 | 70808.6 |
| transcription elongation factor greb | EDM03_02260 | Not Available | Positive | 456740 - 457219 | 17528.9 |
| hypothetical protein | EDM03_02265 | Not Available | Positive | 457212 - 457688 | 16749.4 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | EDM03_02270 | Not Available | Positive | 457728 - 458981 | 46209.6 |
| hypothetical protein | EDM03_02275 | Not Available | Negative | 458985 - 459317 | 12486.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
