Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Erythrobacteraceae
Genus
Porphyrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Erythrobacteraceae |
| Genus | Porphyrobacter |
| Species | Porphyrobacter sp. IPPAS B-1204 |
| Strain | Mongol_c3139 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
637374 bp
Thymine Count
629951 bp
Guanine Count
1131862 bp
Cytosine Count
1150325 bp
Genome Length
3549519 bp
Protein-coding Genes
3188 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | EDM03_00920 | Not Available | Negative | 175072 - 176508 | 51706.2 |
| pas domain-containing protein | EDM03_00925 | Not Available | Negative | 176512 - 177609 | 38495.3 |
| trna dihydrouridine synthase dusb | EDM03_00930 | Not Available | Negative | 177613 - 178629 | 37091.1 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | EDM03_00935 | Not Available | Positive | 178710 - 179867 | 40564.6 |
| hypothetical protein | EDM03_00940 | Not Available | Positive | 179880 - 180446 | 19376.3 |
| cina family protein | EDM03_00945 | Not Available | Positive | 180453 - 180965 | 17127.7 |
| type ii toxin-antitoxin system rata family toxin | EDM03_00950 | Not Available | Negative | 180926 - 181387 | 17567.9 |
| lipoyl synthase | EDM03_00955 | Not Available | Negative | 181393 - 182346 | 35199.4 |
| hypothetical protein | EDM03_00960 | Not Available | Negative | 182485 - 183870 | 49590.1 |
| dna gyrase subunit a | EDM03_00965 | Not Available | Positive | 184165 - 186969 | 102074.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
