Porphyrobacter sp. IPPAS B-1204 Mongol_c3139

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Porphyrobacter

Description

Porphyrobacter sp. IPPAS B-1204, designated as Mongol_c3139, is characterized by having a single replicon, indicating a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number RHGM00000000.1, which serves as a reference for researchers seeking genetic information about this specific microorganism. Porphyrobacter species are known for their ecological roles, often found in phototrophic environments. They possess the ability to perform photosynthesis, which is crucial for energy production in light-available conditions. This metabolic capability suggests that Porphyrobacter sp. IPPAS B-1204 may occupy niches where light is a significant factor, potentially impacting the dynamics of microbial communities in its habitat. The presence of only one replicon in its genome may also imply a reduced complexity in regulatory mechanisms, allowing for rapid response to environmental changes. This characteristic could be advantageous for survival in fluctuating conditions, enhancing the strain's ecological resilience. In summary, Porphyrobacter sp. IPPAS B-1204 represents a unique microbial entity with a simplified genomic architecture that supports its role in phototrophic ecosystems. Its single replicon structure may provide insights into its adaptability and ecological function, making it a candidate for further studies in microbial ecology and physiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusPorphyrobacter
SpeciesPorphyrobacter sp. IPPAS B-1204
StrainMongol_c3139

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Porphyrobacter sp. IPPAS B-1204 Mongol_c3139, whole genome

Gene Summary

Adenine Count

637374 bp

Thymine Count

629951 bp

Guanine Count

1131862 bp

Cytosine Count

1150325 bp

Genome Length

3549519 bp

Protein-coding Genes

3188 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-54-dependent fis family transcriptional regulatorEDM03_00920Not AvailableNegative175072 - 17650851706.2
pas domain-containing proteinEDM03_00925Not AvailableNegative176512 - 17760938495.3
trna dihydrouridine synthase dusbEDM03_00930Not AvailableNegative177613 - 17862937091.1
bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseEDM03_00935Not AvailablePositive178710 - 17986740564.6
hypothetical proteinEDM03_00940Not AvailablePositive179880 - 18044619376.3
cina family proteinEDM03_00945Not AvailablePositive180453 - 18096517127.7
type ii toxin-antitoxin system rata family toxinEDM03_00950Not AvailableNegative180926 - 18138717567.9
lipoyl synthaseEDM03_00955Not AvailableNegative181393 - 18234635199.4
hypothetical proteinEDM03_00960Not AvailableNegative182485 - 18387049590.1
dna gyrase subunit aEDM03_00965Not AvailablePositive184165 - 186969102074.0

Displaying genes 181 – 190 of 3250 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.