Porphyrobacter sp. IPPAS B-1204 Mongol_c3139

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Porphyrobacter

Description

Porphyrobacter sp. IPPAS B-1204, designated as Mongol_c3139, is characterized by having a single replicon, indicating a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number RHGM00000000.1, which serves as a reference for researchers seeking genetic information about this specific microorganism. Porphyrobacter species are known for their ecological roles, often found in phototrophic environments. They possess the ability to perform photosynthesis, which is crucial for energy production in light-available conditions. This metabolic capability suggests that Porphyrobacter sp. IPPAS B-1204 may occupy niches where light is a significant factor, potentially impacting the dynamics of microbial communities in its habitat. The presence of only one replicon in its genome may also imply a reduced complexity in regulatory mechanisms, allowing for rapid response to environmental changes. This characteristic could be advantageous for survival in fluctuating conditions, enhancing the strain's ecological resilience. In summary, Porphyrobacter sp. IPPAS B-1204 represents a unique microbial entity with a simplified genomic architecture that supports its role in phototrophic ecosystems. Its single replicon structure may provide insights into its adaptability and ecological function, making it a candidate for further studies in microbial ecology and physiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusPorphyrobacter
SpeciesPorphyrobacter sp. IPPAS B-1204
StrainMongol_c3139

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Porphyrobacter sp. IPPAS B-1204 Mongol_c3139, whole genome

Gene Summary

Adenine Count

637374 bp

Thymine Count

629951 bp

Guanine Count

1131862 bp

Cytosine Count

1150325 bp

Genome Length

3549519 bp

Protein-coding Genes

3188 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
coproporphyrinogen iii oxidaseEDM03_00630Not AvailableNegative118383 - 11954341436.4
scp-like extracellularEDM03_00635Not AvailablePositive119601 - 12015521032.1
rdgb/ham1 family non-canonical purine ntp pyrophosphataseEDM03_00640Not AvailableNegative120160 - 12078621900.8
ribonuclease phEDM03_00645Not AvailableNegative120783 - 12149625347.4
heat-inducible transcriptional repressor hrcaEDM03_00650Not AvailablePositive121576 - 12261936643.2
nucleotide exchange factor grpeEDM03_00655Not AvailablePositive122637 - 12320620765.6
hypothetical proteinEDM03_00660Not AvailablePositive123330 - 1235787610.12
vgr related proteinEDM03_00665Not AvailableNegative123582 - 12409119254.2
copper chaperone pcu(a)cEDM03_00670Not AvailableNegative124112 - 12457315222.2
molecular chaperone dnakEDM03_00675Not AvailablePositive124773 - 12669568368.0

Displaying genes 141 – 150 of 3250 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.