Umboniibacter marinipuniceus strain DSM 25080

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Cellvibrionales

Family

Cellvibrionaceae

Genus

Umboniibacter

Description

Umboniibacter marinipuniceus strain DSM 25080 is a Gram-negative, non-motile rod-shaped bacterium. This strain is aerobic, indicating that it requires oxygen for growth. It falls within the mesophilic temperature range, with an optimal growth temperature of 25°C. In terms of genetic characteristics, Umboniibacter marinipuniceus possesses a single replicon, which can be significant for understanding its genomic stability and replication. The strain is cataloged under the accession REFJ00000000.1, which provides a reference for researchers seeking to study its genetic material further. From an ecological perspective, the characteristics of Umboniibacter marinipuniceus suggest that it may thrive in environments where oxygen is abundant and temperatures are moderate. Its mesophilic nature implies that it could play a role in nutrient cycling in marine ecosystems, particularly in areas where conditions are stable and suitable for aerobic microbial activity. Understanding the specific ecological roles of such bacteria can inform studies on marine microbiomes and their functions in broader environmental contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCellvibrionales
FamilyCellvibrionaceae
GenusUmboniibacter
SpeciesUmboniibacter marinipuniceus
Strainstrain DSM 25080

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Umboniibacter marinipuniceus strain DSM 25080 Ga0244554_116, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate synthase (nadph/nadh) large chainDFR27_0199Not AvailablePositive198474 - 202913161244.0
glutamate synthase (nadph) small subunitDFR27_0200Not AvailablePositive202924 - 20434252096.5
uroporphyrinogen decarboxylaseDFR27_0201Not AvailablePositive204424 - 20548539149.1
hd-gyp domain-containing protein (c-di-gmp phosphodiesterase class ii)DFR27_0202Not AvailablePositive205633 - 20696749294.8
phosphatidylserine decarboxylaseDFR27_0203Not AvailableNegative207107 - 20800632250.6
thiosulfate/3-mercaptopyruvate sulfurtransferaseDFR27_0204Not AvailableNegative208003 - 20880629801.1
ribosome biogenesis gtpaseDFR27_0205Not AvailableNegative208816 - 20983237536.8
zinc proteaseDFR27_0206Not AvailableNegative209887 - 212730103473.0
oligoribonucleaseDFR27_0207Not AvailablePositive212889 - 21343120350.5
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive214009 - 214105Not Available

Displaying genes 201 – 210 of 2481 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.