Vibrio sp. SBT000027

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. SBT000027 is characterized by having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The organism is cataloged under the accession REBK00000000.1, which serves as a reference for genetic information related to this particular strain. The presence of a single replicon suggests that Vibrio sp. SBT000027 may exhibit efficient replication and potential advantages in nutrient utilization, allowing it to thrive in diverse conditions. The Vibrio genus is known for its ecological versatility, often found in marine environments and associated with various ecological roles, including that of pathogens in aquatic organisms. Understanding the genetic makeup of Vibrio sp. SBT000027 can provide insights into its ecological interactions and potential applications in biotechnological settings. As with many Vibrio species, this strain may play a role in nutrient cycling within its ecosystem, contributing to the degradation of organic materials and influencing microbial community dynamics. In summary, Vibrio sp. SBT000027, with its single replicon and reference accession, exemplifies the genetic traits that may facilitate its ecological adaptability and functional roles in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. SBT000027
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. SBT000027
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. SBT000027 Vibrio_SBT27_wgs_contig_5, whole genome

Gene Summary

Adenine Count

1545932 bp

Thymine Count

1544921 bp

Guanine Count

1236072 bp

Cytosine Count

1225558 bp

Genome Length

5552483 bp

Protein-coding Genes

4649 genes

Non-Coding Genes

200 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome silencing factorAYK60_21160Not AvailablePositive4736147 - 473646411882.3
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhAYK60_21165Not AvailablePositive4736468 - 473693817434.3
penicillin-binding protein 2AYK60_21170Not AvailablePositive4736945 - 473883771384.2
rod shape-determining protein rodaAYK60_21175Not AvailablePositive4738837 - 473995840660.6
septal ring lytic transglycosylase rlpa family proteinAYK60_21180Not AvailablePositive4739962 - 474080131158.2
d-alanyl-d-alanine carboxypeptidaseAYK60_21185Not AvailablePositive4740898 - 474207643028.4
duf493 family proteinAYK60_21190Not AvailablePositive4742312 - 474258710232.4
lipoyl(octanoyl) transferase lipbAYK60_21195Not AvailablePositive4742783 - 474344224488.4
lipoyl synthaseAYK60_21200Not AvailablePositive4743447 - 474441236480.4
sodium-dependent transporterAYK60_21205Not AvailableNegative4744621 - 474598249082.3

Displaying genes 4171 – 4180 of 4849 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.