Granulicella sibirica strain AF10

rod

Kingdom

Pseudomonadati

Phylum

Acidobacteriota

Class

Terriglobia

Order

Terriglobales

Family

Acidobacteriaceae

Genus

Granulicella

Description

Granulicella sibirica strain AF10 is a Gram-negative, rod-shaped bacterium. It is characterized by having a single replicon, which is significant for its genetic stability and replication processes. The strain is cataloged under the accession number RDSM00000000.1, providing a reference point for researchers interested in its genomic information. The Gram-negative classification suggests that Granulicella sibirica possesses a thin peptidoglycan layer surrounded by an outer membrane, which may confer certain advantages in specific environments, such as resistance to certain antibiotics and the ability to thrive in varied ecological niches. The rod shape of the bacterium is indicative of its potential adaptability and mobility, which can play a role in its survival and interactions within its habitat. Understanding the properties of Granulicella sibirica strain AF10 can provide insights into its ecological role. Gram-negative bacteria often participate in complex nutrient cycling processes in their environments. Their metabolic versatility may contribute to soil health and the degradation of organic materials, emphasizing their importance in ecosystem dynamics. Overall, the traits of Granulicella sibirica strain AF10 highlight its potential significance in microbiological studies and ecological research.

Taxonomy

KingdomPseudomonadati
PhylumAcidobacteriota
ClassTerriglobia
OrderTerriglobales
FamilyAcidobacteriaceae
GenusGranulicella
SpeciesGranulicella sibirica
Strainstrain AF10

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Granulicella sibirica strain AF10

Gene Summary

Adenine Count

1226422 bp

Thymine Count

1240263 bp

Guanine Count

1865260 bp

Cytosine Count

1807685 bp

Genome Length

6139630 bp

Protein-coding Genes

5288 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinGRAN_2003Not AvailablePositive2282381 - 22826359329.27
diguanylate cyclase/phosphodiesterase (ggdef & eal domains) with pas/pac sensor(s)GRAN_2004Not AvailableNegative2282655 - 228471276415.6
cellulose synthase catalytic subunitGRAN_2005Not AvailablePositive2285099 - 2289550162849.0
d-alanyl-d-alanine carboxypeptidaseGRAN_2006Not AvailablePositive2289702 - 229133657389.4
hypothetical proteinGRAN_2007Not AvailablePositive2291410 - 22915294612.83
hypothetical proteinGRAN_2008Not AvailableNegative2291690 - 229282042344.1
tldd/pmba family proteinGRAN_2009Not AvailableNegative2292890 - 229456660893.5
tldd-domain proteinGRAN_2010Not AvailableNegative2294602 - 229633562413.8
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthaseGRAN_2011Not AvailableNegative2296479 - 229727928981.9
peptidase m48, ste24pGRAN_2012Not AvailablePositive2297438 - 229876648841.1

Displaying genes 2011 – 2020 of 5343 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.