Marinifilum sp. JC120

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Marinilabiliales

Family

Marinifilaceae

Genus

Marinifilum

Description

Marinifilum sp. JC120 is a marine bacterium characterized by having a single replicon. It is cataloged under the accession number RDSB00000000.1. The organism's classification within the Marinifilum genus indicates its adaptation to marine environments, which is a common trait among members of this group. The presence of a single replicon suggests a streamlined genomic organization, which may facilitate efficient replication and cellular processes. This trait can be advantageous in fluctuating marine environments where rapid adaptation and growth are necessary for survival. In terms of biological or ecological insights, the adaptation of Marinifilum sp. JC120 to marine habitats may imply a role in biogeochemical cycles or microbial communities in oceanic ecosystems. Such organisms often participate in nutrient cycling, contributing to the overall health and stability of marine environments. Understanding the genomic and physiological traits of Marinifilum sp. JC120 could provide further insights into its specific ecological functions and interactions within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderMarinilabiliales
FamilyMarinifilaceae
GenusMarinifilum
SpeciesMarinifilum sp. JC120
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinifilum sp. JC120 scaffold_340, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3663 genes

Non-Coding Genes

499 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lps export abc transporter periplasmic protein lptcD0S45_04160Not AvailableNegative907285 - 90787521601.3
had-iiia family hydrolaseD0S45_04165Not AvailableNegative907876 - 90839719261.2
3-deoxy-8-phosphooctulonate synthaseD0S45_04170Not AvailableNegative908387 - 90919929278.2
ctp synthaseD0S45_04175Not AvailableNegative909275 - 91090660357.4
phosphoribosylformylglycinamidine synthase subunit purqD0S45_04180Not AvailablePositive911193 - 91200229078.6
nucleoside deaminaseD0S45_04185Not AvailablePositive912054 - 91256018276.2
hypothetical proteinD0S45_04190Not AvailableNegative912607 - 91301116004.9
phosphatidylserine decarboxylaseD0S45_04195Not AvailableNegative913082 - 91431745508.8
Trna-serNot AvailableNot AvailablePositive914580 - 914672Not Available
class i sam-dependent methyltransferaseD0S45_04205Not AvailableNegative914775 - 91560831399.5

Displaying genes 871 – 880 of 4162 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.