Marinifilum sp. JC120

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Marinilabiliales

Family

Marinifilaceae

Genus

Marinifilum

Description

Marinifilum sp. JC120 is a marine bacterium characterized by having a single replicon. It is cataloged under the accession number RDSB00000000.1. The organism's classification within the Marinifilum genus indicates its adaptation to marine environments, which is a common trait among members of this group. The presence of a single replicon suggests a streamlined genomic organization, which may facilitate efficient replication and cellular processes. This trait can be advantageous in fluctuating marine environments where rapid adaptation and growth are necessary for survival. In terms of biological or ecological insights, the adaptation of Marinifilum sp. JC120 to marine habitats may imply a role in biogeochemical cycles or microbial communities in oceanic ecosystems. Such organisms often participate in nutrient cycling, contributing to the overall health and stability of marine environments. Understanding the genomic and physiological traits of Marinifilum sp. JC120 could provide further insights into its specific ecological functions and interactions within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderMarinilabiliales
FamilyMarinifilaceae
GenusMarinifilum
SpeciesMarinifilum sp. JC120
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinifilum sp. JC120 scaffold_340, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3663 genes

Non-Coding Genes

499 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinate--coa ligase subunit alphaD0S45_15065Not AvailablePositive3344231 - 334632774755.1
glycosyltransferase family 1 proteinD0S45_15070Not AvailablePositive3346320 - 334741140657.3
methionine--trna ligaseD0S45_15075Not AvailableNegative3347501 - 334944173759.5
hypothetical proteinD0S45_15080Not AvailableNegative3349664 - 335103152816.3
response regulatorD0S45_15085Not AvailableNegative3351272 - 335167014926.0
dna internalization-related competence protein comec/rec2D0S45_15090Not AvailableNegative3351795 - 335420088958.1
udp-n-acetylglucosamine 1-carboxyvinyltransferaseD0S45_15095Not AvailableNegative3354216 - 335546944754.8
Trna-hisNot AvailableNot AvailablePositive3355798 - 3355873Not Available
Trna-hisNot AvailableNot AvailablePositive3355914 - 3355989Not Available
type ii toxin-antitoxin system pard family antitoxinD0S45_15110Not AvailablePositive3356110 - 33563679800.72

Displaying genes 3041 – 3050 of 4162 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.