Marinifilum sp. JC120

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Marinilabiliales

Family

Marinifilaceae

Genus

Marinifilum

Description

Marinifilum sp. JC120 is a marine bacterium characterized by having a single replicon. It is cataloged under the accession number RDSB00000000.1. The organism's classification within the Marinifilum genus indicates its adaptation to marine environments, which is a common trait among members of this group. The presence of a single replicon suggests a streamlined genomic organization, which may facilitate efficient replication and cellular processes. This trait can be advantageous in fluctuating marine environments where rapid adaptation and growth are necessary for survival. In terms of biological or ecological insights, the adaptation of Marinifilum sp. JC120 to marine habitats may imply a role in biogeochemical cycles or microbial communities in oceanic ecosystems. Such organisms often participate in nutrient cycling, contributing to the overall health and stability of marine environments. Understanding the genomic and physiological traits of Marinifilum sp. JC120 could provide further insights into its specific ecological functions and interactions within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderMarinilabiliales
FamilyMarinifilaceae
GenusMarinifilum
SpeciesMarinifilum sp. JC120
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinifilum sp. JC120 scaffold_340, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3663 genes

Non-Coding Genes

499 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter small permeaseD0S45_14915Not AvailablePositive3307689 - 330820719468.8
trap transporter large permeaseD0S45_14920Not AvailablePositive3308227 - 330950445295.5
zn-dependent hydrolaseD0S45_14925Not AvailablePositive3309520 - 331085148325.4
dihydroorotaseD0S45_14930Not AvailablePositive3310848 - 331189138661.1
orotate phosphoribosyltransferaseD0S45_14935Not AvailablePositive3311958 - 331265325847.0
phosphoenolpyruvate mutaseD0S45_14940Not AvailablePositive3312889 - 331418448060.2
phosphonopyruvate decarboxylaseD0S45_14945Not AvailablePositive3314186 - 331529239763.4
iron-containing alcohol dehydrogenase family proteinD0S45_14950Not AvailablePositive3315292 - 331637739774.6
methyl-accepting chemotaxis proteinD0S45_14955Not AvailableNegative3316470 - 331870780858.8
pbp1a family penicillin-binding proteinD0S45_14960Not AvailableNegative3318823 - 332123489568.9

Displaying genes 3011 – 3020 of 4162 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.