Marinifilum sp. JC120

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Marinilabiliales

Family

Marinifilaceae

Genus

Marinifilum

Description

Marinifilum sp. JC120 is a marine bacterium characterized by having a single replicon. It is cataloged under the accession number RDSB00000000.1. The organism's classification within the Marinifilum genus indicates its adaptation to marine environments, which is a common trait among members of this group. The presence of a single replicon suggests a streamlined genomic organization, which may facilitate efficient replication and cellular processes. This trait can be advantageous in fluctuating marine environments where rapid adaptation and growth are necessary for survival. In terms of biological or ecological insights, the adaptation of Marinifilum sp. JC120 to marine habitats may imply a role in biogeochemical cycles or microbial communities in oceanic ecosystems. Such organisms often participate in nutrient cycling, contributing to the overall health and stability of marine environments. Understanding the genomic and physiological traits of Marinifilum sp. JC120 could provide further insights into its specific ecological functions and interactions within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderMarinilabiliales
FamilyMarinifilaceae
GenusMarinifilum
SpeciesMarinifilum sp. JC120
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinifilum sp. JC120 scaffold_340, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3663 genes

Non-Coding Genes

499 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent 6-phosphofructokinaseD0S45_12845Not AvailablePositive2864334 - 286567149107.3
lysr family transcriptional regulatorD0S45_12850Not AvailableNegative2865787 - 286666533264.8
lyse family translocatorD0S45_12855Not AvailablePositive2866773 - 286740222564.0
hd domain-containing proteinD0S45_12860Not AvailableNegative2867523 - 286884850565.1
dihydroorotaseD0S45_12865Not AvailableNegative2868968 - 287023946075.1
aspartate carbamoyltransferase catalytic subunitD0S45_12870Not AvailableNegative2870383 - 287130634225.2
amidohydrolaseD0S45_12875Not AvailableNegative2871341 - 287249541575.5
hypothetical proteinD0S45_12880Not AvailableNegative2872537 - 287289613477.1
signal peptide peptidase sppaD0S45_12885Not AvailableNegative2872984 - 287395234929.4
ribbon-helix-helix protein, copg familyD0S45_12890Not AvailablePositive2874102 - 28743448812.3

Displaying genes 2601 – 2610 of 4162 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.