Halorientalis pallida strain F13-25

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloarculaceae

Genus

Halorientalis

Description

Halorientalis pallida strain F13-25 is characterized by having a single replicon, which is a notable trait for its genomic structure. The strain is documented with the accession number RDFA00000000.1, indicating its inclusion in genomic databases for further study and reference. As a member of the Halorientalis genus, Halorientalis pallida is likely adapted to specific environmental conditions, possibly including saline or hypersaline environments, which is typical for many halophilic microorganisms. These adaptations can offer insights into the ecological roles such organisms might play in their natural habitats, such as contributing to biogeochemical cycles or influencing microbial community dynamics in extreme environments. The streamlined genomic architecture, indicated by the presence of a single replicon, may suggest efficient replication and regulation mechanisms that are beneficial for survival in challenging conditions. This trait can provide an advantage in resource-limited environments, allowing for rapid growth and adaptation. Overall, Halorientalis pallida strain F13-25 exemplifies how specific genetic traits can influence ecological strategies, potentially making it a key player in microbial ecosystems, particularly in extreme habitats where it may interact with other microorganisms and contribute to community structure and function.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloarculaceae
GenusHalorientalis
SpeciesHalorientalis pallida
Strainstrain F13-25

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorientalis pallida strain F13-25

Gene Summary

Adenine Count

702820 bp

Thymine Count

698994 bp

Guanine Count

1350581 bp

Cytosine Count

1334500 bp

Genome Length

4087668 bp

Protein-coding Genes

3984 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2332 domain-containing proteinEAF64_20310Not AvailablePositive4017844 - 401886637215.1
fe-s cluster assembly protein sufdEAF64_20315Not AvailableNegative4018901 - 402011845396.8
fe-s cluster assembly protein sufbEAF64_20320Not AvailableNegative4020134 - 40203487795.13
abc transporter atp-binding proteinEAF64_20325Not AvailableNegative4020458 - 402139034353.3
pas domain-containing proteinEAF64_20330Not AvailablePositive4021669 - 402339662934.4
dna polymerase elongation subunitEAF64_20335Not AvailableNegative4023389 - 4026157105222.0
hypothetical proteinEAF64_20340Not AvailablePositive4026271 - 40264536390.04
hypothetical proteinEAF64_20350Not AvailablePositive4026901 - 402735316037.5
dna double-strand break repair rad50 atpaseEAF64_20355Not AvailableNegative4027350 - 4030040102594.0
exonuclease sbccd subunit dEAF64_20360Not AvailableNegative4030037 - 403132047123.1

Displaying genes 3971 – 3980 of 4030 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.