Halorientalis pallida strain F13-25

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloarculaceae

Genus

Halorientalis

Description

Halorientalis pallida strain F13-25 is characterized by having a single replicon, which is a notable trait for its genomic structure. The strain is documented with the accession number RDFA00000000.1, indicating its inclusion in genomic databases for further study and reference. As a member of the Halorientalis genus, Halorientalis pallida is likely adapted to specific environmental conditions, possibly including saline or hypersaline environments, which is typical for many halophilic microorganisms. These adaptations can offer insights into the ecological roles such organisms might play in their natural habitats, such as contributing to biogeochemical cycles or influencing microbial community dynamics in extreme environments. The streamlined genomic architecture, indicated by the presence of a single replicon, may suggest efficient replication and regulation mechanisms that are beneficial for survival in challenging conditions. This trait can provide an advantage in resource-limited environments, allowing for rapid growth and adaptation. Overall, Halorientalis pallida strain F13-25 exemplifies how specific genetic traits can influence ecological strategies, potentially making it a key player in microbial ecosystems, particularly in extreme habitats where it may interact with other microorganisms and contribute to community structure and function.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloarculaceae
GenusHalorientalis
SpeciesHalorientalis pallida
Strainstrain F13-25

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorientalis pallida strain F13-25

Gene Summary

Adenine Count

702820 bp

Thymine Count

698994 bp

Guanine Count

1350581 bp

Cytosine Count

1334500 bp

Genome Length

4087668 bp

Protein-coding Genes

3984 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcription initiation factor iibEAF64_12360Not AvailableNegative2362046 - 236301136417.8
ribonuclease hi family proteinEAF64_12365Not AvailablePositive2363204 - 236379721603.8
rnha operon proteinEAF64_12370Not AvailablePositive2363790 - 236440722860.6
padr family transcriptional regulatorEAF64_12375Not AvailableNegative2364404 - 236476313753.0
inorganic diphosphataseEAF64_12380Not AvailablePositive2365090 - 236562020357.3
atp-grasp domain-containing proteinEAF64_12385Not AvailableNegative2365617 - 236690348150.2
nucleotide pyrophosphataseEAF64_12390Not AvailablePositive2367524 - 236887050863.0
hypothetical proteinEAF64_12395Not AvailableNegative2368903 - 23691609138.37
hypothetical proteinEAF64_12400Not AvailableNegative2369186 - 236989626153.6
universal stress proteinEAF64_12405Not AvailableNegative2369958 - 237037114638.1

Displaying genes 2431 – 2440 of 4030 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.