Halorientalis pallida strain F13-25

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloarculaceae

Genus

Halorientalis

Description

Halorientalis pallida strain F13-25 is characterized by having a single replicon, which is a notable trait for its genomic structure. The strain is documented with the accession number RDFA00000000.1, indicating its inclusion in genomic databases for further study and reference. As a member of the Halorientalis genus, Halorientalis pallida is likely adapted to specific environmental conditions, possibly including saline or hypersaline environments, which is typical for many halophilic microorganisms. These adaptations can offer insights into the ecological roles such organisms might play in their natural habitats, such as contributing to biogeochemical cycles or influencing microbial community dynamics in extreme environments. The streamlined genomic architecture, indicated by the presence of a single replicon, may suggest efficient replication and regulation mechanisms that are beneficial for survival in challenging conditions. This trait can provide an advantage in resource-limited environments, allowing for rapid growth and adaptation. Overall, Halorientalis pallida strain F13-25 exemplifies how specific genetic traits can influence ecological strategies, potentially making it a key player in microbial ecosystems, particularly in extreme habitats where it may interact with other microorganisms and contribute to community structure and function.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloarculaceae
GenusHalorientalis
SpeciesHalorientalis pallida
Strainstrain F13-25

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorientalis pallida strain F13-25

Gene Summary

Adenine Count

702820 bp

Thymine Count

698994 bp

Guanine Count

1350581 bp

Cytosine Count

1334500 bp

Genome Length

4087668 bp

Protein-coding Genes

3984 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fad synthaseEAF64_11360Not AvailablePositive2165359 - 216579016008.8
pyridoxamine 5'-phosphate oxidaseEAF64_11365Not AvailableNegative2165794 - 216617414152.4
abrb/maze/spovt family dna-binding domain-containing proteinEAF64_11370Not AvailablePositive2166282 - 21665519977.53
pin domain-containing proteinEAF64_11375Not AvailablePositive2166548 - 216698815844.0
pyridoxal phosphate-dependent aminotransferaseEAF64_11380Not AvailableNegative2167018 - 216816640857.3
6,7-dimethyl-8-ribityllumazine synthaseEAF64_11385Not AvailableNegative2168163 - 216856414010.4
tigr03663 family proteinEAF64_11390Not AvailablePositive2168689 - 217056368271.4
5-(carboxyamino)imidazole ribonucleotide synthaseEAF64_11395Not AvailablePositive2170625 - 217177341576.6
5-(carboxyamino)imidazole ribonucleotide mutaseEAF64_11400Not AvailablePositive2171770 - 217241122904.6
hypothetical proteinEAF64_11405Not AvailablePositive2172497 - 217326726926.4

Displaying genes 2231 – 2240 of 4030 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.