Halorientalis pallida strain F13-25

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloarculaceae

Genus

Halorientalis

Description

Halorientalis pallida strain F13-25 is characterized by having a single replicon, which is a notable trait for its genomic structure. The strain is documented with the accession number RDFA00000000.1, indicating its inclusion in genomic databases for further study and reference. As a member of the Halorientalis genus, Halorientalis pallida is likely adapted to specific environmental conditions, possibly including saline or hypersaline environments, which is typical for many halophilic microorganisms. These adaptations can offer insights into the ecological roles such organisms might play in their natural habitats, such as contributing to biogeochemical cycles or influencing microbial community dynamics in extreme environments. The streamlined genomic architecture, indicated by the presence of a single replicon, may suggest efficient replication and regulation mechanisms that are beneficial for survival in challenging conditions. This trait can provide an advantage in resource-limited environments, allowing for rapid growth and adaptation. Overall, Halorientalis pallida strain F13-25 exemplifies how specific genetic traits can influence ecological strategies, potentially making it a key player in microbial ecosystems, particularly in extreme habitats where it may interact with other microorganisms and contribute to community structure and function.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloarculaceae
GenusHalorientalis
SpeciesHalorientalis pallida
Strainstrain F13-25

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorientalis pallida strain F13-25

Gene Summary

Adenine Count

702820 bp

Thymine Count

698994 bp

Guanine Count

1350581 bp

Cytosine Count

1334500 bp

Genome Length

4087668 bp

Protein-coding Genes

3984 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha/beta hydrolaseEAF64_09890Not AvailablePositive1863393 - 186438235403.0
copper abc transporter permeaseEAF64_09895Not AvailableNegative1864513 - 186531627370.2
abc transporter atp-binding proteinEAF64_09900Not AvailableNegative1865313 - 186610726799.6
copper-binding proteinEAF64_09905Not AvailableNegative1866107 - 186801166527.9
nitrous oxide reductase accessory protein noslEAF64_09910Not AvailableNegative1868028 - 186871724512.9
sulfite exporter taue/safe family proteinEAF64_09915Not AvailableNegative1868781 - 186956926528.9
sco family proteinEAF64_09920Not AvailableNegative1869569 - 187026125317.4
hypothetical proteinEAF64_09925Not AvailablePositive1870369 - 187098621827.7
winged helix-turn-helix transcriptional regulatorEAF64_09930Not AvailableNegative1871017 - 187152919323.8
hypothetical proteinEAF64_09935Not AvailableNegative1871628 - 187194511105.2

Displaying genes 1941 – 1950 of 4030 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.