Halorientalis pallida strain F13-25

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloarculaceae

Genus

Halorientalis

Description

Halorientalis pallida strain F13-25 is characterized by having a single replicon, which is a notable trait for its genomic structure. The strain is documented with the accession number RDFA00000000.1, indicating its inclusion in genomic databases for further study and reference. As a member of the Halorientalis genus, Halorientalis pallida is likely adapted to specific environmental conditions, possibly including saline or hypersaline environments, which is typical for many halophilic microorganisms. These adaptations can offer insights into the ecological roles such organisms might play in their natural habitats, such as contributing to biogeochemical cycles or influencing microbial community dynamics in extreme environments. The streamlined genomic architecture, indicated by the presence of a single replicon, may suggest efficient replication and regulation mechanisms that are beneficial for survival in challenging conditions. This trait can provide an advantage in resource-limited environments, allowing for rapid growth and adaptation. Overall, Halorientalis pallida strain F13-25 exemplifies how specific genetic traits can influence ecological strategies, potentially making it a key player in microbial ecosystems, particularly in extreme habitats where it may interact with other microorganisms and contribute to community structure and function.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloarculaceae
GenusHalorientalis
SpeciesHalorientalis pallida
Strainstrain F13-25

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorientalis pallida strain F13-25

Gene Summary

Adenine Count

702820 bp

Thymine Count

698994 bp

Guanine Count

1350581 bp

Cytosine Count

1334500 bp

Genome Length

4087668 bp

Protein-coding Genes

3984 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleoside recognition proteinEAF64_06610Not AvailablePositive1240657 - 124168535376.6
cbs domain-containing proteinEAF64_06615Not AvailableNegative1242041 - 124298233245.3
endonucleaseEAF64_06620Not AvailablePositive1243079 - 124404433934.5
sulfite oxidaseEAF64_06625Not AvailablePositive1244085 - 124520640460.1
had family hydrolaseEAF64_06630Not AvailableNegative1245198 - 124580921261.2
coae operon proteinEAF64_06635Not AvailableNegative1245806 - 124622215392.8
flagellar hook-basal body complex protein flieEAF64_06640Not AvailableNegative1246219 - 124677920747.2
Trna-argNot AvailableNot AvailablePositive1246891 - 1246997Not Available
hypothetical proteinEAF64_06650Not AvailableNegative1247113 - 124745712959.2
hlyc/corc family transporterEAF64_06655Not AvailableNegative1247724 - 124880038225.6

Displaying genes 1301 – 1310 of 4030 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.