Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CMSX59b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1456567 bp
Thymine Count
1458766 bp
Guanine Count
1495280 bp
Cytosine Count
1486582 bp
Genome Length
6110873 bp
Protein-coding Genes
7095 genes
Non-Coding Genes
339 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-xylosidase | EAI42_03310 | Not Available | Positive | 623430 - 625748 | 88084.0 |
| asma family protein | EAI42_03315 | Not Available | Negative | 625801 - 627510 | 62275.9 |
| xanthine permease xanp | EAI42_03320 | Not Available | Negative | 627631 - 629022 | 48871.2 |
| sodium/glutamate symport carrier protein | EAI42_03325 | Not Available | Positive | 629302 - 630507 | 42445.9 |
| hypothetical protein | EAI42_03330 | Not Available | Positive | 630510 - 631376 | 33220.7 |
| atp-dependent dna helicase recg | EAI42_03335 | Not Available | Negative | 631361 - 632131 | 28532.4 |
| atp-dependent dna helicase | EAI42_03340 | Not Available | Negative | 632764 - 633534 | 28246.4 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | EAI42_03345 | Not Available | Negative | 633540 - 634229 | 25344.6 |
| bifunctional (p)ppgpp synthetase ii/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | EAI42_03350 | Not Available | Negative | 634236 - 636344 | 79347.1 |
| dna-directed rna polymerase subunit omega | EAI42_03355 | Not Available | Negative | 636363 - 636638 | 10237.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





