Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CMSX59b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1456567 bp
Thymine Count
1458766 bp
Guanine Count
1495280 bp
Cytosine Count
1486582 bp
Genome Length
6110873 bp
Protein-coding Genes
7095 genes
Non-Coding Genes
339 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent malic enzyme | EAI42_38095 | Not Available | Positive | 6082137 - 6082515 | 13580.3 |
| nad-dependent malic enzyme | EAI42_38100 | Not Available | Positive | 6082646 - 6083024 | 13580.3 |
| chitoporin | EAI42_38105 | Not Available | Negative | 6083155 - 6083662 | 18964.6 |
| penicillin binding protein pbp4b | EAI42_38110 | Not Available | Positive | 6083664 - 6084170 | 18581.2 |
| is1 family transposase | EAI42_38120 | Not Available | Negative | 6084509 - 6084678 | 6661.16 |
| serine protease | EAI42_38125 | Not Available | Positive | 6084679 - 6085186 | 17865.2 |
| glucans biosynthesis glucosyltransferase mdoh | EAI42_38130 | Not Available | Negative | 6085187 - 6085694 | 19327.1 |
| glucans biosynthesis glucosyltransferase mdoh | EAI42_38135 | Not Available | Negative | 6085695 - 6086202 | 19327.1 |
| serine protease | EAI42_38140 | Not Available | Positive | 6086203 - 6086710 | 17863.3 |
| dienelactone hydrolase family protein | EAI42_38145 | Not Available | Positive | 6086781 - 6087218 | 16219.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





