Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CMSX59b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1456567 bp
Thymine Count
1458766 bp
Guanine Count
1495280 bp
Cytosine Count
1486582 bp
Genome Length
6110873 bp
Protein-coding Genes
7095 genes
Non-Coding Genes
339 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2541 family protein | EAI42_37735 | Not Available | Positive | 6050536 - 6050784 | 8903.99 |
| copper transporter | EAI42_37740 | Not Available | Positive | 6050785 - 6051303 | 19180.4 |
| aldehyde dehydrogenase family protein | EAI42_37745 | Not Available | Positive | 6051351 - 6051821 | 17243.7 |
| aldehyde dehydrogenase family protein | EAI42_37750 | Not Available | Positive | 6051869 - 6052339 | 17345.8 |
| autotransporter outer membrane beta-barrel domain-containing protein | EAI42_37755 | Not Available | Negative | 6052450 - 6052857 | 14972.3 |
| 30s ribosomal protein s16 | EAI42_37760 | Not Available | Negative | 6052858 - 6052927 | 2605.16 |
| hypothetical protein | EAI42_37765 | Not Available | Negative | 6053116 - 6053374 | 9764.63 |
| duf2813 domain-containing protein | EAI42_37770 | Not Available | Negative | 6053375 - 6053891 | 20021.7 |
| fructuronate reductase | EAI42_37775 | Not Available | Positive | 6053892 - 6054408 | 19270.3 |
| hypothetical protein | EAI42_37780 | Not Available | Positive | 6054409 - 6054925 | 18855.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





