Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CMSX59b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1456567 bp
Thymine Count
1458766 bp
Guanine Count
1495280 bp
Cytosine Count
1486582 bp
Genome Length
6110873 bp
Protein-coding Genes
7095 genes
Non-Coding Genes
339 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allantoin permease | EAI42_37385 | Not Available | Positive | 6019242 - 6019715 | 17202.4 |
| duf3461 family protein | EAI42_37390 | Not Available | Negative | 6019776 - 6020162 | 15097.0 |
| phosphoglyceromutase | EAI42_37395 | Not Available | Negative | 6020308 - 6020395 | 3467.23 |
| galactose-1-epimerase | EAI42_37400 | Not Available | Negative | 6020582 - 6020840 | 9654.01 |
| fad-binding oxidoreductase | EAI42_37405 | Not Available | Positive | 6020841 - 6021372 | 18862.7 |
| type ii secretion system protein gspe | EAI42_37410 | Not Available | Positive | 6021373 - 6021904 | 19504.8 |
| act domain-containing protein | EAI42_37415 | Not Available | Positive | 6021905 - 6022388 | 18043.5 |
| act domain-containing protein | EAI42_37420 | Not Available | Positive | 6022437 - 6022920 | 18043.5 |
| type ii secretion system protein gspe | EAI42_37425 | Not Available | Positive | 6022969 - 6023500 | 19507.8 |
| regulator | EAI42_37430 | Not Available | Negative | 6023501 - 6024032 | 19941.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





