Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CMSX59b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1456567 bp
Thymine Count
1458766 bp
Guanine Count
1495280 bp
Cytosine Count
1486582 bp
Genome Length
6110873 bp
Protein-coding Genes
7095 genes
Non-Coding Genes
339 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrochelatase | EAI42_37335 | Not Available | Negative | 6014970 - 6015504 | 20027.1 |
| ferrochelatase | EAI42_37340 | Not Available | Negative | 6015505 - 6016039 | 20055.1 |
| carnitinyl-coa dehydratase | EAI42_37345 | Not Available | Positive | 6016040 - 6016193 | 5773.82 |
| phenylacetic acid degradation protein paay | EAI42_37350 | Not Available | Positive | 6016199 - 6016573 | 12857.7 |
| gntr family transcriptional regulator | EAI42_37355 | Not Available | Positive | 6016787 - 6017107 | 11957.9 |
| gntr family transcriptional regulator | EAI42_37360 | Not Available | Positive | 6017321 - 6017641 | 11957.9 |
| alpha-amlyase | EAI42_37365 | Not Available | Positive | 6017642 - 6017795 | 5615.72 |
| valine--pyruvate transaminase | EAI42_37370 | Not Available | Positive | 6017973 - 6018175 | 7294.79 |
| signal peptide peptidase sppa | EAI42_37375 | Not Available | Negative | 6018510 - 6018708 | 7059.46 |
| allantoin permease | EAI42_37380 | Not Available | Positive | 6018709 - 6019182 | 17232.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





