Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CMSX59b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1456567 bp
Thymine Count
1458766 bp
Guanine Count
1495280 bp
Cytosine Count
1486582 bp
Genome Length
6110873 bp
Protein-coding Genes
7095 genes
Non-Coding Genes
339 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | EAI42_37085 | Not Available | Negative | 5990358 - 5990744 | 14297.9 |
| sprt family zinc-dependent metalloprotease | EAI42_37090 | Not Available | Positive | 5990745 - 5991189 | 17227.8 |
| sprt family zinc-dependent metalloprotease | EAI42_37095 | Not Available | Positive | 5991287 - 5991731 | 17254.8 |
| asparagine--trna ligase | EAI42_37100 | Not Available | Negative | 5991972 - 5992370 | 15237.2 |
| mechanosensitive channel msck | EAI42_37105 | Not Available | Negative | 5992371 - 5992911 | 19559.4 |
| mechanosensitive channel msck | EAI42_37110 | Not Available | Negative | 5992912 - 5993452 | 19559.4 |
| galactose-1-epimerase | EAI42_37115 | Not Available | Positive | 5993453 - 5993993 | 19776.1 |
| lysr family transcriptional regulator | EAI42_37120 | Not Available | Positive | 5993994 - 5994534 | 19945.8 |
| lysr family transcriptional regulator | EAI42_37125 | Not Available | Positive | 5994535 - 5995075 | 19916.8 |
| translocation/assembly module tamb | EAI42_37130 | Not Available | Positive | 5995076 - 5995616 | 19519.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





