Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CMSX59b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1456567 bp
Thymine Count
1458766 bp
Guanine Count
1495280 bp
Cytosine Count
1486582 bp
Genome Length
6110873 bp
Protein-coding Genes
7095 genes
Non-Coding Genes
339 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major capsid protein e | EAI42_37035 | Not Available | Positive | 5985312 - 5985855 | 20150.9 |
| mannonate dehydratase | EAI42_37040 | Not Available | Positive | 5985856 - 5986399 | 20383.4 |
| major capsid protein e | EAI42_37045 | Not Available | Positive | 5986400 - 5986943 | 20140.9 |
| trimethylamine n-oxide reductase catalytic subunit tora | EAI42_37050 | Not Available | Negative | 5986944 - 5987487 | 20060.7 |
| trimethylamine-n-oxide reductase tora | EAI42_37055 | Not Available | Negative | 5987488 - 5988031 | 20090.8 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EAI42_37060 | Not Available | Positive | 5988032 - 5988574 | 19419.8 |
| hypothetical protein | EAI42_37065 | Not Available | Positive | 5988575 - 5989117 | 19071.2 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase | EAI42_37070 | Not Available | Positive | 5989118 - 5989660 | 20107.9 |
| hypothetical protein | EAI42_37075 | Not Available | Positive | 5989661 - 5989885 | 8637.45 |
| hypothetical protein | EAI42_37080 | Not Available | Negative | 5989939 - 5990202 | 9725.71 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





