Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CMSX59b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1456567 bp
Thymine Count
1458766 bp
Guanine Count
1495280 bp
Cytosine Count
1486582 bp
Genome Length
6110873 bp
Protein-coding Genes
7095 genes
Non-Coding Genes
339 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | EAI42_36885 | Not Available | Negative | 5970499 - 5970996 | 17708.2 |
| dipeptidase pepe | EAI42_36890 | Not Available | Negative | 5971052 - 5971315 | 9178.14 |
| 23s rrna pseudouridine(2604) synthase rluf | EAI42_36895 | Not Available | Positive | 5971527 - 5971603 | 2983.53 |
| aldehyde dehydrogenase family protein | EAI42_36900 | Not Available | Negative | 5971604 - 5972154 | 19927.9 |
| formate c-acetyltransferase | EAI42_36905 | Not Available | Positive | 5972188 - 5972705 | 20123.1 |
| aldehyde dehydrogenase family protein | EAI42_36910 | Not Available | Negative | 5972706 - 5973256 | 19899.8 |
| sensor histidine kinase | EAI42_36915 | Not Available | Negative | 5973257 - 5973806 | 20382.7 |
| dimethyl sulfoxide reductase subunit a | EAI42_36920 | Not Available | Negative | 5973807 - 5974356 | 19728.5 |
| sensor histidine kinase | EAI42_36925 | Not Available | Negative | 5974357 - 5974906 | 20382.7 |
| dimethyl sulfoxide reductase subunit a | EAI42_36930 | Not Available | Negative | 5974907 - 5975456 | 19701.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





