Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CMSX59b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1456567 bp
Thymine Count
1458766 bp
Guanine Count
1495280 bp
Cytosine Count
1486582 bp
Genome Length
6110873 bp
Protein-coding Genes
7095 genes
Non-Coding Genes
339 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | EAI42_36685 | Not Available | Positive | 5953763 - 5954324 | 19644.3 |
| 3-hydroxyacyl-coa dehydrogenase | EAI42_36690 | Not Available | Positive | 5954325 - 5954886 | 20324.6 |
| dihydroxy-acid dehydratase | EAI42_36695 | Not Available | Positive | 5954887 - 5955448 | 19630.3 |
| lysr family transcriptional regulator | EAI42_36700 | Not Available | Positive | 5955449 - 5956010 | 20835.0 |
| lysr family transcriptional regulator | EAI42_36705 | Not Available | Positive | 5956011 - 5956572 | 20875.1 |
| atp-binding cassette domain-containing protein | EAI42_36710 | Not Available | Negative | 5956573 - 5957101 | 19517.2 |
| excinuclease abc subunit a | EAI42_36715 | Not Available | Positive | 5957133 - 5957692 | 19950.9 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit c | EAI42_36720 | Not Available | Positive | 5957693 - 5957927 | 8423.08 |
| hypothetical protein | EAI42_36725 | Not Available | Positive | 5958121 - 5958252 | 5082.07 |
| pitrilysin | EAI42_36730 | Not Available | Negative | 5958253 - 5958812 | 20554.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





