Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CMSX59b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1456567 bp
Thymine Count
1458766 bp
Guanine Count
1495280 bp
Cytosine Count
1486582 bp
Genome Length
6110873 bp
Protein-coding Genes
7095 genes
Non-Coding Genes
339 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EAI42_36080 | Not Available | Negative | 5897523 - 5897818 | 9904.05 |
| nickel-responsive transcriptional regulator nikr | EAI42_36085 | Not Available | Negative | 5898021 - 5898111 | 3272.86 |
| succinate--coa ligase subunit alpha | EAI42_36090 | Not Available | Positive | 5898191 - 5898700 | 17686.7 |
| alpha/beta hydrolase | EAI42_36095 | Not Available | Negative | 5898701 - 5898936 | 9202.78 |
| amidohydrolase | EAI42_36100 | Not Available | Negative | 5899029 - 5899289 | 9980.99 |
| hypothetical protein | EAI42_36105 | Not Available | Negative | 5899528 - 5899876 | 12948.2 |
| abc transporter permease | EAI42_36110 | Not Available | Positive | 5899877 - 5900051 | 6336.09 |
| isas1 family transposase | EAI42_36115 | Not Available | Negative | 5900216 - 5900462 | 9284.33 |
| cell envelope integrity protein cred | EAI42_36120 | Not Available | Positive | 5900463 - 5901046 | 21600.2 |
| sodium:alanine symporter family protein | EAI42_36125 | Not Available | Positive | 5901047 - 5901629 | 20527.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





