Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CMSX59b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1456567 bp
Thymine Count
1458766 bp
Guanine Count
1495280 bp
Cytosine Count
1486582 bp
Genome Length
6110873 bp
Protein-coding Genes
7095 genes
Non-Coding Genes
339 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imp dehydrogenase | EAI42_35815 | Not Available | Positive | 5870815 - 5871415 | 20233.3 |
| imp dehydrogenase | EAI42_35820 | Not Available | Positive | 5871416 - 5872016 | 20233.3 |
| amino acid permease | EAI42_35825 | Not Available | Positive | 5872017 - 5872617 | 21982.4 |
| amino acid permease | EAI42_35830 | Not Available | Positive | 5872618 - 5873218 | 21982.4 |
| had family hydrolase | EAI42_35835 | Not Available | Negative | 5873223 - 5873818 | 20316.8 |
| selenocysteine-specific translation elongation factor | EAI42_35840 | Not Available | Positive | 5873819 - 5874417 | 22032.4 |
| selenocysteine-specific translation elongation factor | EAI42_35845 | Not Available | Positive | 5874418 - 5875016 | 22010.3 |
| methyl-accepting chemotaxis protein | EAI42_35850 | Not Available | Negative | 5875017 - 5875130 | 4205.43 |
| hypothetical protein | EAI42_35855 | Not Available | Positive | 5875340 - 5875462 | 4384.22 |
| carbon starvation protein csta | EAI42_35860 | Not Available | Positive | 5875507 - 5875615 | 3991.11 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





