Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CMSX59b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1456567 bp
Thymine Count
1458766 bp
Guanine Count
1495280 bp
Cytosine Count
1486582 bp
Genome Length
6110873 bp
Protein-coding Genes
7095 genes
Non-Coding Genes
339 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EAI42_01925 | Not Available | Negative | 348481 - 348813 | 12271.6 |
| type iii secretion system needle complex protein | EAI42_01930 | Not Available | Negative | 348833 - 349072 | 9022.49 |
| hypothetical protein | EAI42_01935 | Not Available | Negative | 349086 - 349340 | 9902.23 |
| hypothetical protein | EAI42_01940 | Not Available | Positive | 349341 - 349580 | 8602.92 |
| hydrogenase-4 component e | EAI42_01945 | Not Available | Positive | 349592 - 350242 | 23363.0 |
| hydrogenase-4 component f | EAI42_01950 | Not Available | Positive | 350247 - 351827 | 56770.7 |
| hydrogenase large subunit | EAI42_01955 | Not Available | Positive | 351817 - 352917 | 41758.2 |
| hypothetical protein | EAI42_01960 | Not Available | Positive | 353206 - 353625 | 16034.3 |
| hydrogenase 4 subunit h | EAI42_01965 | Not Available | Positive | 353635 - 354174 | 20116.3 |
| hydrogenase-4 component i | EAI42_01970 | Not Available | Positive | 354171 - 354929 | 28088.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





