Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CMSX59b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1456567 bp
Thymine Count
1458766 bp
Guanine Count
1495280 bp
Cytosine Count
1486582 bp
Genome Length
6110873 bp
Protein-coding Genes
7095 genes
Non-Coding Genes
339 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv conjugative transfer system coupling protein trad | EAI42_00355 | Not Available | Positive | 46145 - 48343 | 83217.5 |
| conjugative transfer relaxase/helicase trai | EAI42_00360 | Not Available | Positive | 48343 - 53613 | 191978.0 |
| type-f conjugative transfer system pilin acetylase trax | EAI42_00365 | Not Available | Positive | 53633 - 54379 | 27252.5 |
| fertility inhibition protein fino | EAI42_00370 | Not Available | Positive | 54434 - 54994 | 21176.8 |
| hypothetical protein | EAI42_00375 | Not Available | Positive | 55125 - 55337 | 8207.77 |
| endonuclease | EAI42_00380 | Not Available | Positive | 55579 - 56040 | 17852.7 |
| duf2726 domain-containing protein | EAI42_00390 | Not Available | Positive | 56333 - 56923 | 22955.4 |
| replication regulatory protein repa2 | EAI42_00395 | Not Available | Positive | 57163 - 57417 | 9438.51 |
| replication protein repa | EAI42_00400 | Not Available | Negative | 57461 - 57625 | 6228.66 |
| repa leader peptide tap | EAI42_00405 | Not Available | Positive | 57655 - 57729 | 2680.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





