Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CMSX59b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1456567 bp
Thymine Count
1458766 bp
Guanine Count
1495280 bp
Cytosine Count
1486582 bp
Genome Length
6110873 bp
Protein-coding Genes
7095 genes
Non-Coding Genes
339 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system pilin assembly protein traf | EAI42_00305 | Not Available | Positive | 38057 - 38830 | 29196.3 |
| conjugal transfer protein trba | EAI42_00310 | Not Available | Positive | 38846 - 39193 | 12962.6 |
| type-f conjugative transfer system pilin chaperone traq | EAI42_00315 | Not Available | Positive | 39312 - 39596 | 10965.5 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | EAI42_00320 | Not Available | Positive | 39583 - 40128 | 19786.0 |
| conjugal transfer protein trbj | EAI42_00325 | Not Available | Positive | 40058 - 40420 | 13344.6 |
| conjugal transfer protein trah | EAI42_00330 | Not Available | Positive | 40417 - 41793 | 50395.4 |
| conjugal transfer protein trag | EAI42_00335 | Not Available | Positive | 41790 - 44612 | 102619.0 |
| surface exclusion protein | EAI42_00340 | Not Available | Positive | 44627 - 45130 | 19372.4 |
| complement resistance protein trat | EAI42_00345 | Not Available | Positive | 45159 - 45893 | 26006.3 |
| hypothetical protein | EAI42_00350 | Not Available | Negative | 45820 - 46035 | 8232.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





