Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CMJH98b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1242564 bp
Thymine Count
1242962 bp
Guanine Count
1280493 bp
Cytosine Count
1272148 bp
Genome Length
5219583 bp
Protein-coding Genes
7105 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein vask | EAI46_11475 | Not Available | Negative | 2137166 - 2140492 | 123966.0 |
| hypothetical protein | EAI46_11480 | Not Available | Negative | 2140549 - 2141763 | 44637.8 |
| hypothetical protein | EAI46_11485 | Not Available | Negative | 2141841 - 2142392 | 20696.2 |
| lytic transglycosylase domain-containing protein | EAI46_11490 | Not Available | Negative | 2142394 - 2142996 | 23280.9 |
| type vi secretion system tip protein vgrg | EAI46_11495 | Not Available | Negative | 2143018 - 2145525 | 92689.6 |
| type vi secretion system atpase tssh | EAI46_11500 | Not Available | Negative | 2145537 - 2148182 | 97773.1 |
| hcp family type vi secretion system effector | EAI46_11505 | Not Available | Negative | 2148373 - 2148864 | 18635.9 |
| ompa family protein | EAI46_11510 | Not Available | Negative | 2148922 - 2150574 | 60406.2 |
| dotu family type iv/vi secretion system protein | EAI46_11515 | Not Available | Negative | 2150587 - 2151252 | 25330.8 |
| type vi secretion system baseplate subunit tssk | EAI46_11520 | Not Available | Negative | 2151249 - 2152586 | 49569.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





