[Ruminococcus] torques strain aa_0143

Gram-positiveCocciAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Mediterraneibacter

Description

[Ruminococcus] torques strain aa_0143 is a Gram-positive, anaerobic bacterium characterized by its cocci shape. This strain is specifically associated with the gut microbiome of Gallus gallus, commonly known as the domestic chicken. Its ability to thrive in an anaerobic environment suggests a specialized adaptation to the gut ecosystem, which is largely devoid of oxygen. The presence of flagella indicates a potential for motility, which may enhance its ability to colonize the gut and interact with the host’s digestive processes. The single replicon structure of its genome suggests a streamlined genetic organization, which may be reflective of its ecological niche and lifestyle within the gut microbiome. Understanding the role of [Ruminococcus] torques strain aa_0143 in the gut of Gallus gallus can provide insights into the complex interactions within the gut microbiota. Its anaerobic and motile traits may contribute to the fermentation processes that are vital for nutrient absorption and overall gut health in its avian host. Further research into this strain could illuminate its specific functions and contributions to the gut ecosystem, emphasizing the importance of microbial diversity in host health. The accession number for this strain is RCYR00000000.1, which can be used for further genetic analysis and exploration of its biological functions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusMediterraneibacter
SpeciesMediterraneibacter torques
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of [Ruminococcus] torques strain aa_0143
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Ruminococcus] torques strain aa_0143 Scaffold_0091, whole genome

Gene Summary

Adenine Count

846731 bp

Thymine Count

903301 bp

Guanine Count

585791 bp

Cytosine Count

666375 bp

Genome Length

3002198 bp

Protein-coding Genes

2615 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rok family proteinEAI93_13175Not AvailablePositive2773403 - 277430232183.1
giy-yig nuclease family proteinEAI93_13180Not AvailableNegative2774388 - 27746369730.74
m23 family metallopeptidaseEAI93_13185Not AvailableNegative2774718 - 277545826652.9
spoiid/lytb domain-containing proteinEAI93_13190Not AvailableNegative2775557 - 277659739194.7
hypothetical proteinEAI93_13195Not AvailableNegative2776658 - 277729623999.2
glycogen/starch/alpha-glucan phosphorylaseEAI93_13200Not AvailableNegative2777342 - 277981395170.5
isoleucine--trna ligaseEAI93_13205Not AvailableNegative2779906 - 2783055120222.0
hamp domain-containing proteinEAI93_13210Not AvailableNegative2784000 - 278514842246.3
dna-binding response regulatorEAI93_13215Not AvailableNegative2785145 - 278581925293.3
thioredoxinEAI93_13220Not AvailablePositive2785938 - 27861025665.28

Displaying genes 2521 – 2530 of 2743 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.