[Ruminococcus] torques strain aa_0143

Gram-positiveCocciAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Mediterraneibacter

Description

[Ruminococcus] torques strain aa_0143 is a Gram-positive, anaerobic bacterium characterized by its cocci shape. This strain is specifically associated with the gut microbiome of Gallus gallus, commonly known as the domestic chicken. Its ability to thrive in an anaerobic environment suggests a specialized adaptation to the gut ecosystem, which is largely devoid of oxygen. The presence of flagella indicates a potential for motility, which may enhance its ability to colonize the gut and interact with the host’s digestive processes. The single replicon structure of its genome suggests a streamlined genetic organization, which may be reflective of its ecological niche and lifestyle within the gut microbiome. Understanding the role of [Ruminococcus] torques strain aa_0143 in the gut of Gallus gallus can provide insights into the complex interactions within the gut microbiota. Its anaerobic and motile traits may contribute to the fermentation processes that are vital for nutrient absorption and overall gut health in its avian host. Further research into this strain could illuminate its specific functions and contributions to the gut ecosystem, emphasizing the importance of microbial diversity in host health. The accession number for this strain is RCYR00000000.1, which can be used for further genetic analysis and exploration of its biological functions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusMediterraneibacter
SpeciesMediterraneibacter torques
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of [Ruminococcus] torques strain aa_0143
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Ruminococcus] torques strain aa_0143 Scaffold_0091, whole genome

Gene Summary

Adenine Count

846731 bp

Thymine Count

903301 bp

Guanine Count

585791 bp

Cytosine Count

666375 bp

Genome Length

3002198 bp

Protein-coding Genes

2615 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-deoxy-7-phosphoheptulonate synthaseEAI93_12160Not AvailableNegative2524914 - 252592737059.2
cida/lrga family proteinEAI93_12165Not AvailablePositive2526243 - 252663214512.6
lrgb family proteinEAI93_12170Not AvailablePositive2526629 - 252730923160.4
clc family h(+)/cl(-) exchange transporterEAI93_12175Not AvailablePositive2527393 - 252896156265.5
ump kinaseEAI93_12180Not AvailablePositive2529014 - 252970924949.1
ribosome recycling factorEAI93_12185Not AvailablePositive2529742 - 253029320777.1
isoprenyl transferaseEAI93_12190Not AvailablePositive2530368 - 253107527051.2
phosphatidate cytidylyltransferaseEAI93_12195Not AvailablePositive2531079 - 253189129387.1
1-deoxy-d-xylulose-5-phosphate reductoisomeraseEAI93_12200Not AvailablePositive2531973 - 253311542083.1
rip metalloprotease rsepEAI93_12205Not AvailablePositive2533119 - 253415037554.4

Displaying genes 2331 – 2340 of 2743 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.