[Ruminococcus] torques strain aa_0143

Gram-positiveCocciAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Mediterraneibacter

Description

[Ruminococcus] torques strain aa_0143 is a Gram-positive, anaerobic bacterium characterized by its cocci shape. This strain is specifically associated with the gut microbiome of Gallus gallus, commonly known as the domestic chicken. Its ability to thrive in an anaerobic environment suggests a specialized adaptation to the gut ecosystem, which is largely devoid of oxygen. The presence of flagella indicates a potential for motility, which may enhance its ability to colonize the gut and interact with the host’s digestive processes. The single replicon structure of its genome suggests a streamlined genetic organization, which may be reflective of its ecological niche and lifestyle within the gut microbiome. Understanding the role of [Ruminococcus] torques strain aa_0143 in the gut of Gallus gallus can provide insights into the complex interactions within the gut microbiota. Its anaerobic and motile traits may contribute to the fermentation processes that are vital for nutrient absorption and overall gut health in its avian host. Further research into this strain could illuminate its specific functions and contributions to the gut ecosystem, emphasizing the importance of microbial diversity in host health. The accession number for this strain is RCYR00000000.1, which can be used for further genetic analysis and exploration of its biological functions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusMediterraneibacter
SpeciesMediterraneibacter torques
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of [Ruminococcus] torques strain aa_0143
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Ruminococcus] torques strain aa_0143 Scaffold_0091, whole genome

Gene Summary

Adenine Count

846731 bp

Thymine Count

903301 bp

Guanine Count

585791 bp

Cytosine Count

666375 bp

Genome Length

3002198 bp

Protein-coding Genes

2615 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ftsx-like permease family proteinEAI93_09295Not AvailableNegative1924455 - 192701695162.9
abc transporter atp-binding proteinEAI93_09300Not AvailableNegative1927006 - 192769225188.6
padr family transcriptional regulatorEAI93_09305Not AvailableNegative1927815 - 192834520362.0
mate family efflux transporterEAI93_09310Not AvailablePositive1928474 - 192979647283.1
hypothetical proteinEAI93_09320Not AvailableNegative1929977 - 193029712694.9
hypothetical proteinEAI93_09325Not AvailableNegative1930674 - 19308717585.8
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdEAI93_09330Not AvailableNegative1930814 - 193231656435.7
hd domain-containing proteinEAI93_09335Not AvailableNegative1932381 - 193332535471.0
serine proteaseEAI93_09340Not AvailableNegative1933579 - 193486246000.5
endonuclease muts2EAI93_09345Not AvailablePositive1935002 - 193737788143.9

Displaying genes 1791 – 1800 of 2743 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.