[Ruminococcus] torques strain aa_0143

Gram-positiveCocciAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Mediterraneibacter

Description

[Ruminococcus] torques strain aa_0143 is a Gram-positive, anaerobic bacterium characterized by its cocci shape. This strain is specifically associated with the gut microbiome of Gallus gallus, commonly known as the domestic chicken. Its ability to thrive in an anaerobic environment suggests a specialized adaptation to the gut ecosystem, which is largely devoid of oxygen. The presence of flagella indicates a potential for motility, which may enhance its ability to colonize the gut and interact with the host’s digestive processes. The single replicon structure of its genome suggests a streamlined genetic organization, which may be reflective of its ecological niche and lifestyle within the gut microbiome. Understanding the role of [Ruminococcus] torques strain aa_0143 in the gut of Gallus gallus can provide insights into the complex interactions within the gut microbiota. Its anaerobic and motile traits may contribute to the fermentation processes that are vital for nutrient absorption and overall gut health in its avian host. Further research into this strain could illuminate its specific functions and contributions to the gut ecosystem, emphasizing the importance of microbial diversity in host health. The accession number for this strain is RCYR00000000.1, which can be used for further genetic analysis and exploration of its biological functions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusMediterraneibacter
SpeciesMediterraneibacter torques
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of [Ruminococcus] torques strain aa_0143
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Ruminococcus] torques strain aa_0143


Gene Summary

Adenine Count

846731 bp

Thymine Count

903301 bp

Guanine Count

585791 bp

Cytosine Count

666375 bp

Genome Length

3002198 bp

Protein-coding Genes

2615 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
merr family transcriptional regulatorEAI93_05935Not AvailablePositive1236716 - 123752531404.3
alcohol dehydrogenaseEAI93_05940Not AvailableNegative1237512 - 123855538177.6
duf4190 domain-containing proteinEAI93_05945Not AvailableNegative1238598 - 12388769690.38
1,3-beta-galactosyl-n-acetylhexosamine phosphorylaseEAI93_05950Not AvailableNegative1239043 - 124119983227.8
hypothetical proteinEAI93_05955Not AvailableNegative1241271 - 12414506309.15
carbohydrate abc transporter permeaseEAI93_05960Not AvailableNegative1241463 - 124235633351.2
sugar abc transporter permeaseEAI93_05965Not AvailableNegative1242372 - 124326233299.5
carbohydrate abc transporter substrate-binding proteinEAI93_05970Not AvailableNegative1243379 - 124480052238.5
arac family transcriptional regulatorEAI93_05975Not AvailablePositive1245055 - 124589432757.7
mate family efflux transporterEAI93_05980Not AvailableNegative1245905 - 124725748633.1

Displaying genes 1181 – 1190 of 2743 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.