Eubacterium ramulus strain aa_0143

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Eubacteriaceae

Genus

Eubacterium

Description

Eubacterium ramulus strain aa_0143 is a Gram-positive anaerobic bacterium primarily found in the gut of Homo sapiens. This bacterium is characterized by its ability to thrive in environments devoid of oxygen, aligning with its classification as an anaerobe. Eubacterium ramulus possesses flagella, which may provide it with motility, potentially aiding in its colonization and survival in the complex gut microbiota. The strain is notable for having a single replicon, which suggests a streamlined genetic architecture that can be advantageous for adaptation and survival within its niche. The accession number for this strain is RCYH00000000.1, which serves as a reference for genomic data. The presence of Eubacterium ramulus in the human gut underscores its potential role in the complex microbial ecosystem. As a member of the gut microbiota, it may contribute to various metabolic processes, including the fermentation of dietary fibers, which can influence host health and digestion. Understanding the specific functions and interactions of Eubacterium ramulus within the gut microbiome can provide insights into its ecological significance and potential impacts on human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyEubacteriaceae
GenusEubacterium
SpeciesEubacterium ramulus
Strainstrain aa_0143

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Eubacterium ramulus strain aa_0143 Scaffold_0052, whole genome

Gene Summary

Adenine Count

888372 bp

Thymine Count

902960 bp

Guanine Count

668935 bp

Cytosine Count

696998 bp

Genome Length

3157265 bp

Protein-coding Genes

2694 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phenylalanine--trna ligase subunit alphaEAI88_13055Not AvailableNegative2830884 - 283190338283.2
yihy/virulence factor brkb family proteinEAI88_13060Not AvailableNegative2832418 - 283328433218.0
spoiid/lytb domain-containing proteinEAI88_13065Not AvailableNegative2833374 - 283539573444.0
cytidine deaminaseEAI88_13075Not AvailableNegative2835832 - 283622114046.9
deoxyribose-phosphate aldolaseEAI88_13080Not AvailableNegative2836223 - 283687323883.8
branched-chain amino acid abc transporterEAI88_13085Not AvailableNegative2837059 - 283832145834.1
hypothetical proteinEAI88_13090Not AvailableNegative2838551 - 283891013364.8
threonine synthaseEAI88_13095Not AvailableNegative2838925 - 284041554851.5
3-isopropylmalate dehydratase small subunitEAI88_13100Not AvailableNegative2840718 - 284121218265.7
3-isopropylmalate dehydratase large subunitEAI88_13105Not AvailableNegative2841212 - 284248645335.7

Displaying genes 2541 – 2550 of 2817 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.