Eubacterium ramulus strain aa_0143

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Eubacteriaceae

Genus

Eubacterium

Description

Eubacterium ramulus strain aa_0143 is a Gram-positive anaerobic bacterium primarily found in the gut of Homo sapiens. This bacterium is characterized by its ability to thrive in environments devoid of oxygen, aligning with its classification as an anaerobe. Eubacterium ramulus possesses flagella, which may provide it with motility, potentially aiding in its colonization and survival in the complex gut microbiota. The strain is notable for having a single replicon, which suggests a streamlined genetic architecture that can be advantageous for adaptation and survival within its niche. The accession number for this strain is RCYH00000000.1, which serves as a reference for genomic data. The presence of Eubacterium ramulus in the human gut underscores its potential role in the complex microbial ecosystem. As a member of the gut microbiota, it may contribute to various metabolic processes, including the fermentation of dietary fibers, which can influence host health and digestion. Understanding the specific functions and interactions of Eubacterium ramulus within the gut microbiome can provide insights into its ecological significance and potential impacts on human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyEubacteriaceae
GenusEubacterium
SpeciesEubacterium ramulus
Strainstrain aa_0143

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Eubacterium ramulus strain aa_0143 Scaffold_0052, whole genome

Gene Summary

Adenine Count

888372 bp

Thymine Count

902960 bp

Guanine Count

668935 bp

Cytosine Count

696998 bp

Genome Length

3157265 bp

Protein-coding Genes

2694 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEAI88_09575Not AvailableNegative2075023 - 207649553307.0
nad-dependent dna ligase ligaEAI88_09580Not AvailableNegative2076539 - 207854875199.1
pseudouridine synthaseEAI88_09585Not AvailableNegative2078561 - 207934029811.4
hypothetical proteinEAI88_09590Not AvailableNegative2079429 - 207988117151.4
sh3 domain-containing proteinEAI88_09595Not AvailableNegative2080008 - 208143553828.7
Trna-argNot AvailableNot AvailablePositive2081610 - 2081681Not Available
pqqd family proteinEAI88_09605Not AvailablePositive2081734 - 208203011103.7
shikimate kinaseEAI88_09615Not AvailableNegative2084283 - 208479518811.7
type i 3-dehydroquinate dehydrataseEAI88_09620Not AvailableNegative2084827 - 208560929388.1
shikimate dehydrogenaseEAI88_09625Not AvailablePositive2085798 - 208667031515.1

Displaying genes 1871 – 1880 of 2817 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.