Eubacterium ramulus strain aa_0143

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Eubacteriaceae

Genus

Eubacterium

Description

Eubacterium ramulus strain aa_0143 is a Gram-positive anaerobic bacterium primarily found in the gut of Homo sapiens. This bacterium is characterized by its ability to thrive in environments devoid of oxygen, aligning with its classification as an anaerobe. Eubacterium ramulus possesses flagella, which may provide it with motility, potentially aiding in its colonization and survival in the complex gut microbiota. The strain is notable for having a single replicon, which suggests a streamlined genetic architecture that can be advantageous for adaptation and survival within its niche. The accession number for this strain is RCYH00000000.1, which serves as a reference for genomic data. The presence of Eubacterium ramulus in the human gut underscores its potential role in the complex microbial ecosystem. As a member of the gut microbiota, it may contribute to various metabolic processes, including the fermentation of dietary fibers, which can influence host health and digestion. Understanding the specific functions and interactions of Eubacterium ramulus within the gut microbiome can provide insights into its ecological significance and potential impacts on human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyEubacteriaceae
GenusEubacterium
SpeciesEubacterium ramulus
Strainstrain aa_0143

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Eubacterium ramulus strain aa_0143 Scaffold_0052, whole genome

Gene Summary

Adenine Count

888372 bp

Thymine Count

902960 bp

Guanine Count

668935 bp

Cytosine Count

696998 bp

Genome Length

3157265 bp

Protein-coding Genes

2694 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxin reductaseEAI88_05770Not AvailablePositive1238919 - 123976730980.3
redox-regulated atpase ychfEAI88_05775Not AvailablePositive1239947 - 124104740010.7
ylmc/ymxh family sporulation proteinEAI88_05780Not AvailablePositive1241224 - 12414789555.01
transcriptional repressor nrdrEAI88_05785Not AvailablePositive1241509 - 124196117603.1
yqeg family had iiia-type phosphataseEAI88_05790Not AvailablePositive1242056 - 124257420078.2
ribose 5-phosphate isomerase bEAI88_05795Not AvailablePositive1242669 - 124310615479.5
elongation factor pEAI88_05800Not AvailablePositive1243228 - 124378820420.1
pyridoxal phosphate-dependent aminotransferaseEAI88_05805Not AvailablePositive1243882 - 124505144893.7
polysaccharide biosynthesis proteinEAI88_05810Not AvailableNegative1245232 - 124659349753.5
aminotransferase class v-fold plp-dependent enzymeEAI88_05815Not AvailablePositive1246680 - 124783142303.6

Displaying genes 1171 – 1180 of 2817 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.