Kingdom
Pseudomonadati
Phylum
Class
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | /taxonomy?kingdom=Pseudomonadati&level=phylum |
| Class | /taxonomy?kingdom=Pseudomonadati&level=klass |
| Order | /taxonomy?kingdom=Pseudomonadati&level=order |
| Family | /taxonomy?kingdom=Pseudomonadati&level=family |
| Genus | /taxonomy?kingdom=Pseudomonadati&level=genus |
| Species | Bacteroidetes/Chlorobi group bacterium Naka2016 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820934 bp
Thymine Count
823969 bp
Guanine Count
482268 bp
Cytosine Count
488495 bp
Genome Length
2615666 bp
Protein-coding Genes
2193 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | D9V84_04255 | Not Available | Positive | 968992 - 970062 | 38458.9 |
| radical sam protein | D9V84_04260 | Not Available | Negative | 970304 - 971569 | 49250.4 |
| glycosyltransferase family 1 protein | D9V84_04265 | Not Available | Negative | 971617 - 972825 | 46268.2 |
| hypothetical protein | D9V84_04270 | Not Available | Negative | 972798 - 973199 | 15564.6 |
| crispr-associated endonuclease cas2 | D9V84_04275 | Not Available | Negative | 974235 - 974498 | 10307.5 |
| type i-b crispr-associated endonuclease cas1 | D9V84_04280 | Not Available | Negative | 974498 - 975490 | 39291.8 |
| crispr-associated protein cas4 | D9V84_04285 | Not Available | Negative | 975487 - 975990 | 19780.3 |
| crispr-associated protein cas5 | D9V84_04290 | Not Available | Negative | 976024 - 976767 | 27919.1 |
| devr family crispr-associated autoregulator | D9V84_04295 | Not Available | Negative | 976748 - 977719 | 35737.0 |
| type i-a crispr-associated protein csa5 | D9V84_04300 | Not Available | Negative | 977743 - 979164 | 53661.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
