Bacteroidetes/Chlorobi group bacterium Naka2016

Kingdom

Pseudomonadati

Phylum

Class

Order

Family

Genus

Description

Bacteroidetes/Chlorobi group bacterium Naka2016 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic information for this organism is cataloged under the accession number RCNP00000000.1, which provides a reference for studies involving its genetic composition and potential functional attributes. Being part of the Bacteroidetes/Chlorobi group suggests that Naka2016 may play a significant role in biogeochemical cycles, particularly in the degradation of complex organic materials. Members of this group are known for their diverse metabolic capabilities, which often include the breakdown of polysaccharides and other organic compounds in various ecosystems. The presence of a single replicon could indicate a simplified regulatory mechanism for gene expression and replication, potentially allowing Naka2016 to respond efficiently to changes in environmental conditions. This trait may be advantageous for survival in dynamic habitats, where resource availability can fluctuate. In summary, the Bacteroidetes/Chlorobi group bacterium Naka2016 exemplifies a microbial organism with a unique genomic structure that may contribute to its ecological flexibility. Its single replicon and affiliation with a metabolically diverse group suggest potential roles in organic matter degradation and nutrient cycling, highlighting the importance of such microorganisms in maintaining ecological balance.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Bacteroidetes/Chlorobi group bacterium Naka2016

Gene Summary

Adenine Count

820934 bp

Thymine Count

823969 bp

Guanine Count

482268 bp

Cytosine Count

488495 bp

Genome Length

2615666 bp

Protein-coding Genes

2193 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
m48 family peptidaseD9V84_01000Not AvailableNegative249672 - 25039729062.5
glutamine--fructose-6-phosphate transaminase (isomerizing)D9V84_01005Not AvailableNegative250390 - 25222267669.8
comec/rec2 family competence proteinD9V84_01010Not AvailablePositive252281 - 25414970356.0
peptidoglycan editing factor pgefD9V84_01015Not AvailablePositive254130 - 25488828587.5
dtdp-4-dehydrorhamnose reductaseD9V84_01020Not AvailableNegative254885 - 25573632570.9
dtdp-glucose 4,6-dehydrataseD9V84_01025Not AvailableNegative255733 - 25680340995.9
dtdp-4-keto-6-deoxy-d-glucose epimeraseD9V84_01030Not AvailableNegative256791 - 25740823902.6
hypothetical proteinD9V84_01035Not AvailablePositive257552 - 25934568509.6
pyridoxamine 5'-phosphate oxidaseD9V84_01040Not AvailablePositive259378 - 26001625004.7
methylcrotonoyl-coa carboxylaseD9V84_01045Not AvailableNegative260017 - 26162459413.9

Displaying genes 221 – 230 of 2253 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.