Nocardia seriolae strain HSY-NS02

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Nocardia seriolae strain HSY-NS02 is characterized by the presence of flagella, which may contribute to its motility in aquatic environments. This strain possesses a single replicon, indicating a streamlined genomic structure that could influence its replication and stability within hosts. It has been identified in association with the Japanese eel, Anguilla japonica, suggesting a specific host interaction that could be significant for understanding its ecological role. The accession number for Nocardia seriolae strain HSY-NS02 is RCNK00000000.1, which allows for further genomic and taxonomic studies. The relationship between this strain and its host may offer insights into the dynamics of microbial communities in aquatic ecosystems, particularly in how Nocardia species can impact fish health and disease. Understanding these interactions is crucial for managing fish populations and maintaining biodiversity in their habitats, especially considering the potential implications for aquaculture and wild fishery practices.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusNocardia
SpeciesNocardia seriolae
Strainstrain HSY-NS02

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Anguilla japonica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardia seriolae strain HSY-NS02 Scaffold317, whole genome

Gene Summary

Adenine Count

1227508 bp

Thymine Count

1238435 bp

Guanine Count

2658695 bp

Cytosine Count

2637537 bp

Genome Length

7762195 bp

Protein-coding Genes

6841 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phytoene/squalene synthase family proteinD6158_04210Not AvailablePositive919204 - 92012434210.2
dna-binding proteinD6158_04215Not AvailableNegative920147 - 92051513494.2
serine/threonine protein kinaseD6158_04220Not AvailablePositive920623 - 92263270719.9
3-deoxy-7-phosphoheptulonate synthase class iiD6158_04225Not AvailableNegative922852 - 92424051023.9
polyadenylate-specific 3'-exoribonuclease asD6158_04230Not AvailablePositive924368 - 92486519009.6
1-acyl-sn-glycerol-3-phosphate acyltransferaseD6158_04235Not AvailableNegative924937 - 92566226564.3
rok family proteinD6158_04240Not AvailableNegative925826 - 92683034866.6
arsa family atpaseD6158_04250Not AvailableNegative927819 - 92902442961.9
cyclaseD6158_04260Not AvailableNegative929255 - 92969216119.4
polyketide cyclase / dehydrase and lipid transportD6158_04265Not AvailableNegative929728 - 93012014232.3

Displaying genes 811 – 820 of 6910 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.