Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia seriolae |
| Strain | strain HSY-NS02 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Anguilla japonica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1227508 bp
Thymine Count
1238435 bp
Guanine Count
2658695 bp
Cytosine Count
2637537 bp
Genome Length
7762195 bp
Protein-coding Genes
6841 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | D6158_04110 | Not Available | Negative | 895525 - 896967 | 50341.2 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | D6158_04115 | Not Available | Negative | 897017 - 898093 | 38184.2 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | D6158_04120 | Not Available | Negative | 898090 - 899574 | 50653.3 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | D6158_04125 | Not Available | Negative | 899571 - 901208 | 56131.3 |
| penicillin-binding protein 2 | D6158_04130 | Not Available | Negative | 901376 - 903136 | 62334.8 |
| hypothetical protein | D6158_04135 | Not Available | Negative | 903310 - 903993 | 23636.3 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | D6158_04140 | Not Available | Negative | 904064 - 905044 | 35587.5 |
| transcriptional regulator mraz | D6158_04145 | Not Available | Negative | 905247 - 905678 | 15941.7 |
| duf3040 domain-containing protein | D6158_04150 | Not Available | Negative | 906136 - 906561 | 15071.4 |
| hypothetical protein | D6158_04155 | Not Available | Negative | 906687 - 907127 | 15726.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

