Nocardia seriolae strain HSY-NS02

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Nocardia seriolae strain HSY-NS02 is characterized by the presence of flagella, which may contribute to its motility in aquatic environments. This strain possesses a single replicon, indicating a streamlined genomic structure that could influence its replication and stability within hosts. It has been identified in association with the Japanese eel, Anguilla japonica, suggesting a specific host interaction that could be significant for understanding its ecological role. The accession number for Nocardia seriolae strain HSY-NS02 is RCNK00000000.1, which allows for further genomic and taxonomic studies. The relationship between this strain and its host may offer insights into the dynamics of microbial communities in aquatic ecosystems, particularly in how Nocardia species can impact fish health and disease. Understanding these interactions is crucial for managing fish populations and maintaining biodiversity in their habitats, especially considering the potential implications for aquaculture and wild fishery practices.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusNocardia
SpeciesNocardia seriolae
Strainstrain HSY-NS02

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Anguilla japonica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardia seriolae strain HSY-NS02 Scaffold317, whole genome

Gene Summary

Adenine Count

1227508 bp

Thymine Count

1238435 bp

Guanine Count

2658695 bp

Cytosine Count

2637537 bp

Genome Length

7762195 bp

Protein-coding Genes

6841 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mfs transporterD6158_20310Not AvailablePositive4417067 - 441901969859.7
transcriptional regulatorD6158_20315Not AvailablePositive4419060 - 441999534384.4
9-cis-epoxycarotenoid dioxygenaseD6158_20320Not AvailablePositive4420065 - 442152554062.6
llm class flavin-dependent oxidoreductaseD6158_20325Not AvailablePositive4421540 - 442282944095.6
acetyl-coa c-acyltransferaseD6158_20330Not AvailablePositive4422826 - 442401040103.3
(2,3-dihydroxybenzoyl)adenylate synthaseD6158_20335Not AvailablePositive4424059 - 442578361218.7
thiolase domain-containing proteinD6158_20340Not AvailablePositive4425828 - 442703642488.1
dihydroxy-acid dehydrataseD6158_20345Not AvailableNegative4427046 - 442889964643.2
tetr/acrr family transcriptional regulatorD6158_20350Not AvailablePositive4429013 - 442960021345.4
nitroreductase family deazaflavin-dependent oxidoreductaseD6158_20355Not AvailableNegative4429658 - 443005014476.5

Displaying genes 3851 – 3860 of 6910 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.