Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1146316 bp
Thymine Count
1150010 bp
Guanine Count
1177233 bp
Cytosine Count
1195607 bp
Genome Length
4669166 bp
Protein-coding Genes
4321 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter yfdv | DGZ25_04380 | Not Available | Negative | 864191 - 865135 | 33617.9 |
| oxalyl-coa decarboxylase | DGZ25_04385 | Not Available | Negative | 865205 - 866899 | 60614.9 |
| formyl-coa--oxalate coa-transferase | DGZ25_04390 | Not Available | Negative | 866953 - 868203 | 45830.7 |
| hypothetical protein | DGZ25_04395 | Not Available | Negative | 868716 - 869348 | 22907.4 |
| lipoprotein | DGZ25_04405 | Not Available | Positive | 869682 - 869957 | 10210.5 |
| duf2545 family protein | DGZ25_04410 | Not Available | Negative | 870034 - 870276 | 8923.5 |
| hypothetical protein | DGZ25_04415 | Not Available | Negative | 870510 - 870584 | 2647.13 |
| lipid a biosynthesis palmitoleoyltransferase | DGZ25_04420 | Not Available | Positive | 870629 - 871549 | 35495.5 |
| membrane protein ypdk | DGZ25_04425 | Not Available | Positive | 871905 - 871976 | 2704.57 |
| glutamate--pyruvate aminotransferase alac | DGZ25_04430 | Not Available | Negative | 872041 - 873279 | 46218.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





