Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1146316 bp
Thymine Count
1150010 bp
Guanine Count
1177233 bp
Cytosine Count
1195607 bp
Genome Length
4669166 bp
Protein-coding Genes
4321 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4102 domain-containing protein | DGZ25_04275 | Not Available | Positive | 839028 - 840314 | 50014.9 |
| hypothetical protein | DGZ25_04280 | Not Available | Positive | 840316 - 841062 | 28352.1 |
| alpa family transcriptional regulator | DGZ25_04285 | Not Available | Positive | 841219 - 841410 | 7246.77 |
| hypothetical protein | DGZ25_04290 | Not Available | Positive | 841459 - 841650 | 6885.18 |
| dna-binding protein | DGZ25_04295 | Not Available | Positive | 841732 - 841926 | 7578.22 |
| hypothetical protein | DGZ25_04300 | Not Available | Positive | 841923 - 842309 | 14898.0 |
| replication protein | DGZ25_04305 | Not Available | Positive | 842735 - 843430 | 26821.0 |
| hypothetical protein | DGZ25_04310 | Not Available | Negative | 844137 - 846617 | 95189.7 |
| hypothetical protein | DGZ25_04315 | Not Available | Negative | 847095 - 847271 | 6758.8 |
| serine recombinase | DGZ25_04320 | Not Available | Positive | 847574 - 848200 | 23617.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





