Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1146316 bp
Thymine Count
1150010 bp
Guanine Count
1177233 bp
Cytosine Count
1195607 bp
Genome Length
4669166 bp
Protein-coding Genes
4321 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DGZ25_03055 | Not Available | Positive | 568202 - 569479 | 47361.8 |
| adp-ribosylglycohydrolase family protein | DGZ25_03060 | Not Available | Positive | 569476 - 570480 | 35638.5 |
| sugar kinase | DGZ25_03065 | Not Available | Positive | 570477 - 571442 | 34380.4 |
| transcriptional regulator | DGZ25_03070 | Not Available | Negative | 571416 - 572162 | 28278.8 |
| glycoside hydrolase family 25 protein | DGZ25_03075 | Not Available | Negative | 572214 - 573032 | 31654.8 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | DGZ25_03080 | Not Available | Negative | 573097 - 573897 | 28635.2 |
| hydroxyethylthiazole kinase | DGZ25_03085 | Not Available | Negative | 573894 - 574682 | 27339.8 |
| transcriptional regulator | DGZ25_03090 | Not Available | Negative | 574905 - 575177 | 10134.5 |
| nickel/cobalt homeostasis protein rcnb | DGZ25_03100 | Not Available | Positive | 576341 - 576679 | 12466.8 |
| putative fimbrial-like adhesin protein | DGZ25_03105 | Not Available | Negative | 576761 - 577795 | 36861.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





